Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq2 95.1 2e-14 >seq1 Length=52205531 Score = 154 bits (170), Expect = 2e-32 Identities = 387/580 (67%), Gaps = 10/580 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| |||||||| || |||||||| | || ||||||||||| || || ||| Sbjct 19482588 CACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGT 19482647 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG-ATCCAGAAAAGAA 33422 || ||||| ||||| ||||| || ||||| || || | ||| || | ||| || ||||| Sbjct 19482648 CCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAG-AGCAAAAGCTTCCGGAGAAGAA 19482706 Query 33423 GATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGCTGTCAT 33478 |||||| || || ||| || ||||||| | | ||| | | || ||||| ||| Sbjct 19482707 GATTCCCTCGAC-GCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGTC-- 19482763 Query 33479 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| | | ||||| | |||||||| | || || || || || || ||||| | Sbjct 19482764 -GATCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGT 19482822 Query 33539 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33598 |||||| | | || || || ||||| | || || || | | || || |||| Sbjct 19482823 GGAAGAGACGGGTCTTCTCTTTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCTGTACA 19482882 Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 | || || |||||||| || ||||| |||||||| |||||||| | ||||||| | Sbjct 19482883 TCTCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCCTCGGAGA 19482942 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 ||| || || | || || | || | |||||| || || || || ||| | Sbjct 19482943 CCTGGACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCCATCGGAGGCGG 19483002 Query 33719 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 33778 | || || || | || || | || |||| ||| | ||||| | | ||||| Sbjct 19483003 CGAAGAAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAGAGTCTCCCAAT 19483062 Query 33779 CATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 33838 ||| || | || | || || || ||| | ||||| || || || || || || | Sbjct 19483063 GCCGGATGTCCTGCGAGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCAGCTTTCT 19483122 Query 33839 TATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878 | ||||| | |||||| | |||||||||||||| || Sbjct 19483123 TGTACATTTCCCAGATTTGGGGGTATTGGATTGGGAACAT 19483162 Score = 120 bits (132), Expect = 4e-22 Identities = 240/353 (68%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| |||||||| || || || |||| || ||||||||||| || ||||| Sbjct 45627000 CACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGA 45626941 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| | || ||||| || ||||| ||||| || ||| ||||| |||||| Sbjct 45626940 CCGGGCATCAAACCGCGCTTCTTGAGCCAGAATATCGAGCAGAAGCTGCCAGAGAAGAAG 45626881 Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33482 ||||| || || ||| || ||||| | | | ||| | || | || || | | || Sbjct 45626880 ATTCCCTCGAC-GCAGGCGAAGGCGACGATGCGCTCGGCGAAAGAGTCGGTGGCGTCGAT 45626822 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| ||||| | |||||||| || || || || || |||| |||| || Sbjct 45626821 CCAGCGCAAGGCCCACTGTGCCTTCTTGGCGACGCAGGGGATGGTGTCTACGGCACGGAA 45626762 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 || | ||| ||||| | ||||| | || || || | | || || ||||| || Sbjct 45626761 CAGGTGGTTCTTTTCGGTGGAGTCTTTGATGTAGGTTTCCAAGAGGAGGCTGTACATCTC 45626702 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33655 || || ||||| || ||||| ||||| || ||||||||| | ||||||| Sbjct 45626701 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGGGCCTCGG 45626649 >seq2 Length=49040938 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| || ||||| | || | ||| || | ||| | || | || |||||||| |||||| Sbjct 43314766 TCCCCCTTGATCAACATAACGAGCAGTATCATTGAACACACGCAGCATTGGAACAATACC 43314825 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 |||||| | ||||| || || ||| || || || ||||||||||||| || || Sbjct 43314826 ATTTGATGTCCCATTTGTGCCACGGATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 43314885 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | ||| ||||| || || ||| || | || || ||| || |||||||| || Sbjct 43314886 AACACCAATTCCTCCAGCTGATTTGCTAATGATAGCACACTCTTTCAAAGTGTCATATAT 43314945 Query 63551 ACCCTCTATGCTATCATCGATCATG 63575 |||||||| |||||||| ||||| Sbjct 43314946 TCCCTCTATACTATCATCTTTCATG 43314970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941686917280