Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=52284309 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| || || || ||| | |||||| |||| | ||||| Sbjct 30377952 ATGCAGATCTTTGTGAAAACTTTGACAGGCAAAACTATCACCCTCGAGGTGGAATCCTCT 30378011 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 30378012 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 30378071 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || || || |||||||| |||| | | | | ||| || || Sbjct 30378072 CAGAGGCTGATTTTCGCTGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGATTACAAT 30378131 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| |||| || || || Sbjct 30378132 ATCCAAAAGGAATCCACTCTCCACCTCGTGCT 30378163 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| || || || ||||| | || || | || | ||| Sbjct 30284455 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATTACTTTGGAGGTTGAAAGTTC 30284514 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||| | || || ||||||| ||||| ||||| ||||| || ||||| Sbjct 30284515 TGACACCATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30284574 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| || || || | | || || || || ||||||| | | | | || ||||| Sbjct 30284575 ACAGAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30284634 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || ||||| ||| | || ||||| |||| ||| | || |||| Sbjct 30284635 CATCCAGAAGGAATCCACTCTGCACCTGGTGTTGAGGCTTCGTGGTGGAA 30284684 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826 |||||| | ||||| || || ||||||||||| | || ||| | || | ||| | | Sbjct 30274585 ATGCAAATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274644 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 || ||||| || | ||||| |||||| ||||| || || || ||||| |||| Sbjct 30274645 --GATACCATTGATAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCTCCGGATC 30274702 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || || |||| | || ||||| || ||||| | ||||| | | || |||| Sbjct 30274703 AGCAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATA 30274762 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| || || ||||| ||| | || |||| |||| ||| | || || Sbjct 30274763 ACATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAGGCTTCGGGGTGG 30274811 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || ||||| || | || ||| |||| ||||||| Sbjct 30314070 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30314129 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || ||| |||||| ||||| || || || || || || || Sbjct 30314130 GACACCATTGATAACGTGAAAGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 30314189 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | || || |||||||| |||| | | | | ||| || || Sbjct 30314190 CAGAGACTTATCTTTGCGGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGATTACAAT 30314249 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| ||| |||| || || || Sbjct 30314250 ATCCAAAAAGAATCCACTCTCCACCTCGTGCT 30314281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658163837760