Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 109 1e-18 seq2 109 1e-18 >seq9 Length=37469608 Score = 109 bits (120), Expect = 1e-18 Identities = 100/124 (81%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 111702 CAGTTTTATGTA-CACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760 |||||||||||| ||| ||||| | | ||||| ||||||||||||||||||||||| || Sbjct 5152717 CAGTTTTATGTAGCAC-ACGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACAT 5152775 Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 || || || ||||| |||||||||||| ||| || || || || ||| | || ||||| Sbjct 5152776 GGGCCTGGGCGTTCCATTTAATATTGCATCTTATGCCCTCCTGACATGCATGATTGCTCA 5152835 Query 111821 TTTT 111824 | || Sbjct 5152836 TGTT 5152839 >seq2 Length=49040938 Score = 109 bits (120), Expect = 1e-18 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| || ||||| || | |||||| | || | Sbjct 43314985 TTGCTTCCTTGTGTGCATGAAAGATGATAGTATAGAGGGAATATATGACACTTTGAAAGA 43314926 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG- 363724 |||||| | ||| ||| || || ||||||||||| || | |||||| |||||| Sbjct 43314925 GTGTGCTATCATTAGCAAATCAGCTGGAGGAATTGGTGTTTCTGTTCACAATATTCGTGC 43314866 Query 363725 CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 ||||| ||||||||| || ||||| | |||| | || ||||| | ||||| ||||| Sbjct 43314865 CACAG-GCAGTTACATCCGTGGCACAAATGGGACA-TCAAATGGTATTGTTCCAATGCTG 43314808 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||||||| | ||||||| | || || || || || ||||| ||| | ||||| Sbjct 43314807 CGTGTGTTCAATGATACTGCTCGTTATGTTGATCAAGGGGGAGGCAAGAGGAAAGG 43314752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303341776953656