Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=52284309 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || || || ||| | || ||| |||| || || || Sbjct 30377952 ATGCAGATCTTTGTGAAAACTTTGACAGGCAAAACTATCACCCTCGAGGTGGAATCCTCT 30378011 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 30378012 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 30378071 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| || || ||||||||||| |||| | | | |||||| || Sbjct 30378072 CAGAGGCTGATTTTCGCTGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGATTACAAT 30378131 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| ||||| || Sbjct 30378132 ATCCAAAAGGAATCCAC 30378148 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||| || || || ||||| | ||||| | || || || Sbjct 30284455 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATTACTTTGGAGGTTGAAAGTTC 30284514 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | || || ||||||| ||||| ||||||||||| || ||||| Sbjct 30284515 TGACACCATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30284574 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| || || | | || ||||| || ||||||| | | | | |||||||| Sbjct 30284575 ACAGAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30284634 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 ||| || || ||||| || | || | ||||| || Sbjct 30284635 CATCCAGAAGGAATCCACTCTGCACCTGGTGTTGAG 30284670 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | || ||||| | |||||| | || || || | Sbjct 30378863 AATGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTC 30378922 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| ||||||| ||||| ||||||||||| || ||||| Sbjct 30378923 TGATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30378982 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| || || | | ||| ||||| || ||||||| | | | | |||||||| Sbjct 30378983 ACAGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30379042 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || ||||| || |||| || ||||| Sbjct 30379043 TATCCAGAAGGAATCCACTCTTCACTTGGTGTT 30379075 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || ||||||||||| | || ||| | || || ||| Sbjct 30274585 ATGCAAATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274644 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | ||||| |||||| ||||| || ||||| ||||| ||||| Sbjct 30274645 GATACCATTGATAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCTCCGGATCAG 30274704 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || || || || ||||| | |||| | | ||||||||| Sbjct 30274705 CAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATAAC 30274764 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 || || || ||||| || | || || || || || Sbjct 30274765 ATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAG 30274799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| |||||||| | | | || || | || || || | Sbjct 30274813 ATGCAAATTTTTGTGAAAACTTTAACTGGGAGA-CTATAACTTTGGAGGTTGAAAGCTCT 30274871 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||||| ||||| |||||||| || || || || Sbjct 30274872 GACACTATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCAGACCAG 30274931 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | || ||||| || ||||||| | | | | ||||||||| Sbjct 30274932 CAGAGGCTCATATTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCGGATTATAAC 30274991 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 || || || |||||||| | || |||||||| || Sbjct 30274992 ATCCAGAAGGAATCTACTCTGCACTTAGTGTTGAG 30275026 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || |||||||| || | || || | || || || | Sbjct 30310015 ATGCAAATTTTTGTGAAGACTTTAACTGGGAAGACTATAACTTTGGAGGTTGAAAACTCT 30310074 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||||| ||||| |||||||| || || || || Sbjct 30310075 GACACTATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCAGACCAG 30310134 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | || ||||| || ||||||| | | | | ||||||||| Sbjct 30310135 CAGAGGCTCATATTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCGGATTATAAC 30310194 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 || || || |||||||| | || |||||||| || Sbjct 30310195 ATCCAGAAGGAATCTACTCTGCACTTAGTGTTGAG 30310229 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || ||| | |||||| | || || ||| Sbjct 30284228 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30284287 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| |||||| || || || || || || || || || Sbjct 30284288 GACACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 30284347 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | ||| || || || ||||||| |||| | | |||||||| Sbjct 30284348 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 30284407 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 || || ||||||||||| | || || || || || Sbjct 30284408 ATCCAGAAAGAATCTACTCTGCACTTGGTTTTGAG 30284442 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||||||| | || ||| | || || ||| Sbjct 30309787 ATGCAGATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30309846 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| ||||| ||||| || ||||| ||||| ||||| Sbjct 30309847 GATACCATTGATAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGATCAG 30309906 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || || || || ||||| | |||| | | ||||||||| Sbjct 30309907 CAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATAAC 30309966 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 || || || ||||| || | || || || || || Sbjct 30309967 ATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAG 30310001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932290189740