Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 >seq3 Length=52284309 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG--GAGTCCA 115343 |||||||| |||||||| || | || || |||||||||||| | || | |||| || Sbjct 30284228 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30284287 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| ||| | || ||| || ||| ||||| || || | ||| || | Sbjct 30284288 --GACACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 30284345 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||| | ||| || ||||| | ||||||| | |||| | || ||||||| Sbjct 30284346 AGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 30284405 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 | || || ||||| |||||| | || |||| ||||| | || || |||| Sbjct 30284406 ATATCCAGAAAGAATCTACTCTGCACTTGGTTTTGAGGCTTCGTGGTGGAA 30284456 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || || |||||||||||| | || |||| | Sbjct 30284683 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30284742 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | || ||| ||| ||| || ||||||||| |||| ||||| Sbjct 30284743 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATCA 30284802 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || ||||||| ||| || |||||||| ||||||| ||| |||| || || || Sbjct 30284803 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30284862 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||| || || || || Sbjct 30284863 TATTCAGAAGGAATCCAC 30284880 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || || |||||||||||| | || |||| | Sbjct 30314981 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30315040 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | || ||| ||| ||| || || || ||| |||| ||||| Sbjct 30315041 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATCCCACCAGATCA 30315100 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || ||||||| ||| || |||||||| ||||||| ||| |||| || || || Sbjct 30315101 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30315160 Query 115465 CATTCAAAAAGAGTCTAC 115482 |||||| || || || || Sbjct 30315161 CATTCAGAAGGAATCCAC 30315178 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG--GAGTCCA 115343 |||||||| |||||||| || | || || |||||||||||| | || | |||| || Sbjct 30378408 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30378467 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || ||| | || ||| || ||| || || || || | ||| || | Sbjct 30378468 --GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACC 30378525 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||| | ||| || ||||| | ||||||| | |||| |||| ||||||| Sbjct 30378526 AGCAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTGGCGGATTATA 30378585 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 | ||||| || ||||| ||| | || | || ||||| Sbjct 30378586 ATATTCAGAAGGAGTCCACTTTGCACTTAGTTTTGAG 30378622 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 |||||||||||||| || || | || ||||| ||||| ||| | || |||| | || Sbjct 30274585 ATGCAAATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274644 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | || ||| | || || || ||| || || || ||| |||| |||| Sbjct 30274645 G--ATACCATTGATAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCTCCGGATC 30274702 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||||| ||| || ||||| | ||||| | | |||| | || ||||||| Sbjct 30274703 AGCAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATA 30274762 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 |||| || || || || ||| | || |||| ||||| Sbjct 30274763 ACATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAG 30274799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425340329812960