Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7 145 7e-30 seq2 104 2e-17 seq3 102 8e-17 >seq7 Length=51758522 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || |||| || | ||| || ||||||||||||||||| ||| Sbjct 4236753 GCCACCACGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTTTGAATGTTGTAGTCGGC 4236694 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| ||||| |||||||| || ||| |||| | ||| |||||||| || || Sbjct 4236693 GAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGGG 4236634 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | || | ||| |||| | ||||| Sbjct 4236633 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGAC 4236574 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || ||||| |||||||| Sbjct 4236573 CTCGAGAGTGATGGTCTTTCCGGTCAGTGTCTTAACGAAGATCTGCAT 4236526 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | ||| || ||||| || |||||||| ||| Sbjct 4236981 GCCACCACGGAGACGGAGAACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 4236922 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| ||||| |||||||| || ||| |||| || | |||||||||||| || Sbjct 4236921 GAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGG 4236862 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| || ||||| | || | || || | | ||| | Sbjct 4236861 AATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCAC 4236802 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 4236801 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 4236753 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| || || | |||||| || | || | || |||||||| |||||||||||||| Sbjct 4237666 AGCCCCCACGAAGACGCAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAG 4237607 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| | ||||| | |||||| ||||| |||| || | |||||||||||| | Sbjct 4237606 CAAGGGTTCTTCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTG 4237547 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| |||||| ||| | | || | || || | | ||| | Sbjct 4237546 GGATGCCCTCCTTGTCCTGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCCA 4237487 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || || || |||||||||||||| Sbjct 4237486 CCTCAAGGGTAATGGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 4237438 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| || || | || |||||||| || ||||| || ||| Sbjct 4237208 CCACCACGAAGACGCAACACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGGCG 4237149 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| ||||| || || ||| |||| || | |||||||||||| || Sbjct 4237148 AGGGTCCTTCCATCCTCCAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGT 4237089 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | || || | | ||| | Sbjct 4237088 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCACC 4237029 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 4237028 TCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCATG 4236981 >seq2 Length=49040938 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||| || |||||||| || | Sbjct 4561656 CCTCCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 4561597 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 4561596 AGGGTGCGACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 4561537 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| ||| | | || | || |||| ||| | Sbjct 4561536 ATCCCTTCCTTGTCCTGAATTTTGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACC 4561477 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || | || || ||||| || ||||| Sbjct 4561476 TCAAGAGTTATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 4561430 >seq3 Length=52284309 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | ||||| ||||| || || | ||| |||||||||||||| |||||||| Sbjct 30284227 GCCACCCCTTAAACGAAGCACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGC 30284168 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | |||||| || ||||| || ||| | || | | ||||||||| ||||| Sbjct 30284167 AAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGG 30284108 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| ||| || ||||| | || | || || | ||||| Sbjct 30284107 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGAC 30284048 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| ||| || || || | || || || || || |||||| Sbjct 30284047 CTCAAGGGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATTTGCATG 30283999 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | ||||| ||||| || || | ||| |||||||||||||| |||||||| Sbjct 30378407 GCCACCCCTTAAACGAAGCACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGC 30378348 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | |||||| || ||||| || ||| | || | | ||||||||| ||||| Sbjct 30378347 AAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGG 30378288 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| ||| || ||||| | || | || || | ||||| Sbjct 30378287 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGAC 30378228 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| ||| || || || | || || || || || |||||| Sbjct 30378227 CTCAAGGGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATTTGCATG 30378179 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | || ||||| | || | || || |||||||| || ||||||||| Sbjct 30378179 GCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCTTTTGGATATTGTAATCGGC 30378120 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| || ||||| || ||| | || | | |||||| |||||||| Sbjct 30378119 AAGAGTGCGACCATCCTCGAGTTGCTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGG 30378060 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||||||||| ||| || ||||| | || | || || | ||| || | Sbjct 30378059 GATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAGGATTCCAC 30378000 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||||| || || | |||||| || || |||||||| Sbjct 30377999 CTCGAGGGTGATAGTTTTGCCTGTCAAAGTTTTCACAAAGATCTGCAT 30377952 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | ||||| ||||| || || | ||| |||||||| ||||| || ||||| Sbjct 30309786 GCCACCTCTTAAACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCTGC 30309727 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | ||||| || || || || || | || | | |||||| |||||||| Sbjct 30309726 AAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCCGGAGG 30309667 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| ||| || |||| | || | ||| || | || || | Sbjct 30309666 GATACCCTCTTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGACGATTCTAC 30309607 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || | |||||| ||||| |||||||| Sbjct 30309606 CTCGAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCAT 30309559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008622686720