Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 seq2 87.8 2e-12 seq9 86.0 7e-12 seq7 84.2 2e-11 seq1 84.2 2e-11 >seq3 Length=52284309 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/101 (81%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 126258 TATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCG 126317 ||| || || ||| |||||||||||||||||||||||||||||| | |||||| || Sbjct 41322847 TATATAAAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAA 41322904 Query 126318 GGAGCGTGGGTTCGAACCCCACACCTGACAAATTATTATTG 126358 | |||||||||| || |||||| ||| | | ||||||||| Sbjct 41322905 AGGGCGTGGGTTCAAATCCCACAGCTGTC-ATTTATTATTG 41322944 Score = 82.4 bits (90), Expect = 9e-11 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | || Sbjct 35791175 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGC 35791116 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||| || ||||| ||||| | || || ||| |||||| Sbjct 35791115 GTGGGTTCAAATCCCACTTCTGAC-ATTTCTTTTTGTGATTTTT 35791073 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 46384821 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 46384764 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||| || |||||| ||| || || | | | ||||||| Sbjct 46384763 TTCAAATCCCACAGCTGTCATTTTTTAAATTTAATTTTT 46384725 >seq2 Length=49040938 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/104 (80%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | | Sbjct 35050981 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGT 35050922 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||| |||||||| |||||||| || |||| |||||| Sbjct 35050921 GTGGGTTCAAACCCCACTTCTGACAAA-TAATATTTTTATTTTT 35050879 >seq9 Length=37469608 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 454657 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 454598 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 454597 TGGGTTCAAATCCCACTTCTGACA 454574 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| |||||||||||||||||||| |||| | ||| |||| | | || || | ||| Sbjct 3037328 GTCAGGATGGCCGAGTGGTCTAAGGCGTCAGACTCAAGTTCTGATCCTCTAACGAGGGCG 3037269 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||| || ||||| |||||||| || |||| Sbjct 3037268 TGGGTTCAAATCCCACTTCTGACAAAATAATATT 3037235 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | ||||| ||| | || |||| Sbjct 1973229 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGG-TCCGTAAGG-GCGT 1973286 Query 126325 GGGTTCGAACCCCACACCTGACA 126347 |||||| || |||||| ||| || Sbjct 1973287 GGGTTCAAATCCCACAGCTGTCA 1973309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 9380626 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 9380569 Query 126325 GGGTTCGAACCCCACACCTGACAAA 126349 |||||| || |||||| ||| |||| Sbjct 9380568 GGGTTCAAATCCCACAGCTGTCAAA 9380544 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTC-CCTC-GGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | | || | | || Sbjct 15282527 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTCTGAGGGC 15282586 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 15282587 GTGGGTTCAAATCCCACTTCTGACA 15282611 >seq7 Length=51758522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/92 (82%), Gaps = 4/92 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 4249639 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 4249696 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTAT 126356 |||||| || |||||| ||| | |||||||| Sbjct 4249697 GGGTTCAAATCCCACAGCTGTC--ATTATTAT 4249726 >seq1 Length=52205531 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| || | | | || Sbjct 456258 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTTTGAGGGC 456199 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 456198 GTGGGTTCAAATCCCACTTCTGACA 456174 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 45754683 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 45754626 Query 126328 TTCGAACCCCACACCTGACAAATTATTATT 126357 ||| || |||||| ||| ||| || || || Sbjct 45754625 TTCAAATCCCACAGCTGTCAATTTTTTTTT 45754596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855871781920