Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 >seq3 Length=52284309 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || || |||||||||||| |||| ||| || Sbjct 30284228 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30284287 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || ||| ||||| |||||| | || | |||| Sbjct 30284288 GACACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 30284347 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||||||||| || ||||| || |||||| || ||| | || ||||| ||| Sbjct 30284348 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 30284407 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| ||||||||||| || |||| || Sbjct 30284408 ATCCAGAAAGAATCTACTCTGCACTTGGTTTT 30284439 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || || |||||||||||| |||| ||| || Sbjct 30378408 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30378467 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || ||| || || |||||| | || | |||| Sbjct 30378468 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 30378527 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| |||||||||||||| ||||| || |||||| || ||| |||| ||||| ||| Sbjct 30378528 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTGGCGGATTATAAT 30378587 Query 22014 ATTCAGAAGGAATCTACT 22031 ||||||||||| || ||| Sbjct 30378588 ATTCAGAAGGAGTCCACT 30378605 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | || || | || || || ||||||||| |||| |||| | | Sbjct 30378863 AATGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTC 30378922 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | || | || ||| ||| || || || || |||| | | || Sbjct 30378923 TGATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30378982 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| ||||||||||| || || || || |||||| || | || ||||| || Sbjct 30378983 ACAGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30379042 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 ||| ||||||||||| |||||||| |||| || || Sbjct 30379043 TATCCAGAAGGAATCCACTCTTCACTTGGTGTTGCG 30379078 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| ||||| | ||||| || || ||||| ||||| ||| | || ||| | | Sbjct 30274129 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30274188 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || || ||||||||| | ||| | | || Sbjct 30274189 GACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAAGAGGGTATCCCTCCAGATCAG 30274248 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || |||||||| |||||||| || ||| || ||| | |||||||| ||| Sbjct 30274249 CAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCCGATTATAAT 30274308 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| || || || || |||| | ||||| |||| || Sbjct 30274309 ATTCAGAAGGAGTCCACCCTCCACCTGGTGCTTCGTTTGAGAGGTGG 30274355 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| ||||| | ||||| || || ||||| ||||| ||| | || ||| | | Sbjct 30309559 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30309618 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || || ||||||||| | ||| | || Sbjct 30309619 GACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAG 30309678 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || |||||||| |||||||| || ||| || ||| | || ||||| ||| Sbjct 30309679 CAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCAGATTATAAT 30309738 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| || || || || |||| | |||||| |||| || Sbjct 30309739 ATTCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTAAGAGGTGG 30309785 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || ||||| ||||||||||| |||| ||| | Sbjct 30378636 ATGCAAATTTTTGTCAAGACCTTGACGGGAAAAACCATTACTTTGGAGGTTGAAAGTTCC 30378695 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| || || |||||||| | || | |||| Sbjct 30378696 GATACCATTGATAATGTAAAGGCAAAGATACAGGACAAAGAGGGGATTCCACCAGACCAG 30378755 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || |||||||||||||| || || || |||||| || | || ||||| || Sbjct 30378756 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAAC 30378815 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||||||||| ||||||||| |||| || Sbjct 30378816 ATCCAGAAGGAATCCACTCTTCATTTGGTGTT 30378847 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| |||||| | || || | || || |||||||||||| |||| ||| | | Sbjct 30284683 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30284742 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | || ||| ||| || ||||| || | || | | || Sbjct 30284743 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATCA 30284802 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| ||||| |||||||| |||||| | |||||| || |||| || ||||| Sbjct 30284803 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30284862 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 ||||||||||||||| || || || Sbjct 30284863 TATTCAGAAGGAATCCACCCTCCA 30284886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358121709830632