Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 131 1e-25 seq7 100 2e-16 >seq3 Length=52284309 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| || ||||||||| | ||| ||| ||| || ||||| |||||| Sbjct 30378148 GTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCA 30378089 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| || |||||||| || ||||||||||| ||||| || Sbjct 30378088 GCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTG 30378029 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | |||||| || || | ||| | |||||||| |||| |||| Sbjct 30378028 ACATTATCAATGGTGTCAGAGGATTCCACCTCGAGGGTGATAGTTTTGCCTGTCAAAGTT 30377969 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 30377968 TTCACAAAGATCTGCAT 30377952 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||| || ||||||||| | ||| ||| ||| || ||||| ||||| Sbjct 30314266 GTGGATTCTTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCC 30314207 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || || || || ||||| |||||| ||| Sbjct 30314206 GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCTTTC 30314147 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | ||||| || || | ||| | || ||||| |||| |||| Sbjct 30314146 ACGTTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTATGGTCTTGCCAGTCAAAGTT 30314087 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 30314086 TTCACGAATATCTGCAT 30314070 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || ||||||||||| || | || || || || ||||| || ||||| Sbjct 30378637 ATGCCACCACGAAGCCTCAAAACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCC 30378578 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | ||||||||| ||||| ||||| |||| || | ||| ||||| || Sbjct 30378577 GCCAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGG 30378518 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| ||| | | |||| ||| || | || Sbjct 30378517 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCC 30378458 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | ||||| ||||||| ||| || ||||| || |||||| Sbjct 30378457 ACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATG 30378407 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| ||||||||||| || || || ||| |||||| | |||||||||| Sbjct 30310439 GTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTACCA 30310380 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || |||||||| || ||||| ||||||| ||| Sbjct 30310379 GCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTC 30310320 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| ||| | || || || |||||||| Sbjct 30310319 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTC 30310260 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 30310259 TTCACAAATATCTGCAT 30310243 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || |||||||| || || | ||||||||||| || || || ||||| Sbjct 30284457 ATTCCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCC 30284398 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||||||||| ||||| || || |||| || | ||| ||||| || Sbjct 30284397 GCAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGG 30284338 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || |||||| ||| | | |||| |||||| | || Sbjct 30284337 GGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTGTCTGAACTCTCC 30284278 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | ||||| ||||||| ||| || ||||| || |||||| Sbjct 30284277 ACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATG 30284227 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||| ||||| || || || ||| |||||| | |||||| ||| Sbjct 30284880 GTGGATTCCTTCTGAATATTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCA 30284821 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || || |||||||||||||| ||||||| ||| Sbjct 30284820 GCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTTGCTTTC 30284761 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| ||| | ||||| || |||||||| Sbjct 30284760 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTC 30284701 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 30284700 TTCACAAATATCTGCAT 30284684 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || |||||||| || || | || ||||| || || ||||| ||||| Sbjct 30310016 ATGCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCC 30309957 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | | |||||||| ||||||||||| | || || | ||| || |||||| Sbjct 30309956 GCAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGA 30309897 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| ||| | | |||| ||| || | || Sbjct 30309896 GGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCC 30309837 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || || | ||| || ||||||||||||||| Sbjct 30309836 ACCTCCAAGGTTATGGTCTTTCCAGTTAAAGTCTTCACAAAAATCTGCATG 30309786 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || || || ||| |||||| | |||||| ||| Sbjct 30275236 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCA 30275177 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || |||||||| || ||||| ||||||| ||| Sbjct 30275176 GCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTC 30275117 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| ||| | || || || |||||||| Sbjct 30275116 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTC 30275057 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 30275056 TTCACAAATATCTGCAT 30275040 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || || || ||| |||||| | |||||| ||| Sbjct 30315178 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCA 30315119 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || || || ||||| || ||||| ||||||| ||| Sbjct 30315118 GCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGCTTTC 30315059 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| ||| | ||||| || |||||||| Sbjct 30315058 ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTC 30314999 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 30314998 TTCACAAATATCTGCAT 30314982 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||| || |||||| | || | ||| ||||||||||||||| Sbjct 30274325 GTGGACTCCTTCTGAATATTATAATCGGCAAGGGTTCTTCCATCCTCAAGTTGTTTACCA 30274266 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| || || ||||| || || |||||||| ||||| ||| Sbjct 30274265 GCAAAAATCAGCCTCTGCTGATCTGGAGGGATACCCTCTTTGTCTTGGATCTTAGCTTTG 30274206 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | ||||| || || | ||| | || ||||| |||| |||| Sbjct 30274205 ACATTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTATGGTCTTGCCAGTCAAAGTT 30274146 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 30274145 TTCACGAATATCTGCAT 30274129 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || ||||| || | || | || ||||| || || ||||| ||||| Sbjct 30284685 ATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTGGATTCCTTCTGGATGTTATAATCA 30284626 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| || || || ||||| |||| || | |||||| || || Sbjct 30284625 GCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGTTGATCTGGT 30284566 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||||| || | | || | |||||| | ||| Sbjct 30284565 GGTATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATGGTGTCAGAACTTTCA 30284506 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || ||||||||||| ||||| Sbjct 30284505 ACCTCCAAAGTAATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCAT 30284456 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || |||||||| || || | || ||||| || || ||||| ||||| Sbjct 30274814 ATGCCACCCCGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCC 30274755 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | | |||||||| ||||||||||| | || || | ||| || |||||| Sbjct 30274754 GCAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGA 30274695 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| || | | |||| ||| || | || Sbjct 30274694 GGGATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCC 30274635 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || || | ||| || |||||||| |||||| Sbjct 30274634 ACCTCCAAGGTTATGGTCTTTCCAGTTAAAGTCTTCACAAAAATTTGCATG 30274584 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| ||||||||||||||||| | || || | ||| || |||||||| || || ||||| Sbjct 30309714 ATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCCGGAGGGATACCCTCTTT 30309655 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| ||| | | |||| ||||| | ||||| || || | ||| | Sbjct 30309654 GTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGACGATTCTACCTCGAGGGTTAT 30309595 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| |||| |||||| || || |||||||| Sbjct 30309594 GGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCAT 30309559 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || |||||||| || || | || ||||| | ||||| || |||||| | || | Sbjct 30274574 AGCCTCAAAACCAAGTGCAGGGTGGATTCCATCTGAATATTATAATCGGCAAGGGTTCTT 30274515 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 ||| ||||| ||||||||||| | || || | ||| || |||||||| ||||| || Sbjct 30274514 CCATCCTCAAGCTGTTTACCAGCAAATATCAGCCTCTGCTGATCCGGAGGGATGCCCTCC 30274455 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| ||||| |||| | |||| ||| || | || || |||| ||| Sbjct 30274454 TTGTCTTGGATCTTGGCCTTTACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTT 30274395 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || |||| ||| || |||||||||||||| Sbjct 30274394 ATGGTCTTTCCAGTCAAAGTCTTCACAAAAATCTGCAT 30274357 >seq7 Length=51758522 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||||| || | || ||||| |||||||||||||| ||| Sbjct 4236755 ATGCCACCACGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTTTGAATGTTGTAGTCG 4236696 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || |||||| |||||||||| || ||||| || Sbjct 4236695 GCGAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGG 4236636 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | |||| ||||||| | ||| Sbjct 4236635 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCG 4236576 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || |||||||| || || || || |||||||| Sbjct 4236575 ACCTCGAGAGTGATGGTCTTTCCGGTCAGTGTCTTAACGAAGATCTGCAT 4236526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130774765296