Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 298 1e-75 >seq1 Length=52205531 Score = 298 bits (330), Expect = 1e-75 Identities = 584/854 (68%), Gaps = 22/854 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | ||| |||||| || |||||| | ||||| Sbjct 19483138 ATCTGGGAAATGTACAAGAAAGCTGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTC 19483079 Query 42360 GCCAAGGACACGGCCGGC--TGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAA 42417 | |||||| ||||| |||||| | || | || ||| |||| ||| Sbjct 19483078 TCGCAGGACAT--CCGGCATTGGGAGACTCTAACCGATGGCGAGCGCCATTTCATCACCC 19483021 Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 || | || ||||||||||||||||| || ||||| ||| ||| ||||| ||| | | | Sbjct 19483020 ACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTTGAAAACCTTGCCGGCCGTT 19482961 Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAG 42537 ||||||| ||||| ||| || ||||| ||| |||||||||||| ||||| ||||| | Sbjct 19482960 TCATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTCTACGGCTTTCAGATCGCCATCG 19482901 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCG 42597 ||||| | ||||| ||| ||||| | || || | || ||||| || || | Sbjct 19482900 AGAACATTCACTCCGAGATGTACAGCCTCCTCCTTGAAACCTACATAAAAGACTCCAAAG 19482841 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 || | | | || ||| | ||||| || || || |||||| ||| |||||||| ||| Sbjct 19482840 AGAAGACCCGTCTCTTCCACGCCATTGACACTATTCCCTGCGTCACCAAGAAGGCTAACT 19482781 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 |||| || ||||||||| ||| || | |||| |||| | | || ||||| Sbjct 19482780 GGGCCCTACGCTGGATCGA---CTCCGCCGAGTCCTTCGCCGAGCGCATCGTTGCCTTCG 19482724 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776 || ||||||||| ||||||||||| || ||| ||| ||||||||||||||| || Sbjct 19482723 CCTGCGTCGAGGGAATCTTCTTCTCCGGAAGCTTTTGCTCTATCTTCTGGCTCAAGAAGC 19482664 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 ||| || ||||| ||||| |||||||| |||||||||||| | | ||||||||||| Sbjct 19482663 GAGGCCTC-ATGCCGGGACTTACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGGCTC 19482605 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896 || | ||||| || ||||| || | ||| | | | || |||||| | | ||||| Sbjct 19482604 CACTGCGACTTCGCGTGCCTGCTCTACTCTA---TCATGCGGAACAAGCTCCCCGAGGAG 19482548 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCG 42956 || || ||| ||| | || || || || ||||||| |||||| || | || Sbjct 19482547 CGCGTGAGGGAGATCGTGCGCGATGCAGTTGACATCGAGAGGGAGTTTGTCTGCGACGCG 19482488 Query 42957 CTGCC---CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTAC 43013 || || || || |||| || |||||| | | | ||| | |||||| ||| Sbjct 19482487 CTTCCTTGCGCGT---TGGTGGGGATGAACGGGGCCTTGATGAGTGTGTACATTGAGTTT 19482431 Query 43014 GTCGCCGACCATCTCCT--GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCC 43071 || || || | || |||| | | || | | || ||||| || | || Sbjct 19482430 GTTGCTGATAGGTTGCTCGGTGC--GCTTGGGTGCGGGAAGCTGTACAATGTGCAGAACC 19482373 Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131 | ||||| | |||||| || ||| || |||| ||||||||||| ||||||||||||| Sbjct 19482372 CGTTCGATTGGATGGAGCTTATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCG 19482313 Query 43132 TCGCCGACTACCAG 43145 | | || |||||| Sbjct 19482312 TGGGGGAGTACCAG 19482299 Score = 226 bits (250), Expect = 5e-54 Identities = 411/595 (69%), Gaps = 10/595 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| || | ||| |||||||||||| ||| ||||||| || | ||| Sbjct 45626459 ATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTTTCCCAAGAC 45626518 Query 42369 A-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGC 42427 | ||| |||||| || || | || ||| ||| ||| || | || || Sbjct 45626519 CTCCGCCA-CTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGC 45626577 Query 42428 CTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGA 42487 |||||| |||||||| ||||| || || || ||||| ||| || | |||||||| || Sbjct 45626578 CTTCTTTGCCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTCATGAAGGA 45626637 Query 42488 GGTGCAGTACTTTGAGGCGCGCTGCTT-CTACGGCTTCCAGATAGCCATAGAGAACGTGC 42546 | || || ||||| || ||||| ||||||||||||||| ||||| |||||| | | Sbjct 45626638 AATCCAAGTCTCCGAGGCCCG-TGCTTTCTACGGCTTCCAGATCGCCATCGAGAACATCC 45626696 Query 42547 ACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACG 42606 |||| ||| ||||| | || | | || |||||| || || ||| ||| Sbjct 45626697 ACTCCGAGATGTACAGCCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAACC 45626756 Query 42607 GGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCA 42666 |||||| ||| | || || || |||||| || |||||||| | ||||| | Sbjct 45626757 ACCTGTTCCGTGCCGTAGACACCATCCCCTGCGTCGCCAAGAAGGCACAGTGGGCCTTGC 45626816 Query 42667 ACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 ||||||||| ||||| | |||| |||| | | || ||||| || ||||| Sbjct 45626817 GCTGGATCGACGCCACCGACTCT---TTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCG 45626873 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGA 42786 |||| ||||||||||| ||| |||| ||| || |||||||||||| || | | || Sbjct 45626874 AGGGAATCTTCTTCTCTGGCAGCTTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGA 45626933 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 ||||||| ||||||||||| ||||||||||| | || || ||||| || | |||| Sbjct 45626934 TGCCCGGTCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGGCTTCACTGCGACT 45626993 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 | || |||||| ||| ||| | |||||| | |||| | | ||||||| || Sbjct 45626994 TCGCGTGCCTCTTGTACTC---TCTCCTCAGAAAGAAGCTCACTGAGGAGCGCGT 45627045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330842598080