Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 seq7 84.2 2e-11 >seq3 Length=52284309 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/241 (68%), Gaps = 18/241 (7%) Strand=Plus/Minus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 |||||| || | || || || || || || || ||| ||||||||||| ||||| || Sbjct 30284914 GAAACCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTC 30284855 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 |||||| || | || |||||||| || || ||||| || || | ||||||||| Sbjct 30284854 TGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGG 30284795 Query 34017 CGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC 34076 || | || ||||||||| | | | ||||||| ||||| ||||| | | || Sbjct 30284794 TGGGATGCCTTCTTTGTCC-TGAATCTTTGCTT--------TCACATTATCAATTGTATC 30284744 Query 34077 ---GCATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || ||| || || ||||| || || || || |||||||| || ||||| Sbjct 30284743 AGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 30284684 Query 34128 T 34128 | Sbjct 30284683 T 30284683 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/241 (68%), Gaps = 18/241 (7%) Strand=Plus/Minus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 ||| || || | || || || || || || || ||| ||||||||||||||||| || Sbjct 30315212 GAAGCCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTC 30315153 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 |||||| || | || |||||||| || || ||||| || || | ||||||||| Sbjct 30315152 TGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGG 30315093 Query 34017 CGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC 34076 || | || ||| |||||| | | | ||||||| ||||| ||||| | | || Sbjct 30315092 TGGGATGCCCTCCTTGTCC-TGAATCTTTGCTT--------TCACATTATCAATTGTATC 30315042 Query 34077 ---GCATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || ||| || || ||||| || || || || |||||||| || ||||| Sbjct 30315041 AGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 30314982 Query 34128 T 34128 | Sbjct 30314981 T 30314981 >seq7 Length=51758522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||| || || ||||| ||| ||||||||||||||||||||| || | || Sbjct 4237655 AGACGCAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTTCTT 4237596 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || ||||| ||||| || ||||| |||| | |||||| ||| || | || ||| Sbjct 4237595 CCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCCTCC 4237536 Query 34030 TTGTCCATAATTTT 34043 |||||| |||||| Sbjct 4237535 TTGTCCTGAATTTT 4237522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058973847816