Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 140 4e-28 seq9 104 3e-17 >seq1 Length=52205531 Score = 140 bits (154), Expect = 4e-28 Identities = 308/456 (68%), Gaps = 12/456 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| ||||| || ||||||||||||||||| |||||||| | || ||| |||||| Sbjct 19482302 GTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATAAGCTCCAT 19482361 Query 125818 AAAATCAAATGGGTTCT-----TTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG 125872 |||| || ||||||| ||| | || || | ||||| || | ||| Sbjct 19482362 CCAATCGAACGGGTTCTGCACATTG---TACAGCTTCCCG-CACCC-AAGCGCACCGAGC 19482416 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 | | ||| | || ||||||||||| || |||| | |||||| || | | Sbjct 19482417 AACCTATCAGCAACAAACTCAATGTACACACTCATCAAGGCCCCGTTCATCCCCACCAAC 19482476 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 || || |||||||| ||| ||| || |||| || || || || || |||||||| Sbjct 19482477 GCGCAAGGAAGCGCGTCGCAGACAAACTCCCTCTCGATGTCAACTGCATCGCGCACGATC 19482536 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAA 126051 | | | ||| | | | || |||| | | |||| |||| | || Sbjct 19482537 TCCCTCACGCGCTCCTCGGGGAGCTTGTTCCGCATGATAGAGTAGAGCAGGCACG-CGAA 19482595 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || |||||| |||||||| |||||||||||||| || |||||| ||||| ||||| Sbjct 19482596 GTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGTCCCGGCAT 19482655 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||| || |||||||| | |||||| || | ||||| || ||||||||||||||||| Sbjct 19482656 GAGGCCTCGCTTCTTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTC 19482715 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 || || ||||| |||| || ||||| || ||||| Sbjct 19482716 GACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGA 19482751 Score = 113 bits (124), Expect = 5e-20 Identities = 185/262 (71%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || || || || || || |||||||| || |||||| || || ||||| | ||| Sbjct 45626986 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAACC 45626927 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| |||| || || || ||||||||||||||||| || || Sbjct 45626926 GCGCTTCTTGAGCCAGAATATCGAGCAGAAGCTGCCAGAGAAGAAGATTCCCTCGACGCA 45626867 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| || | || ||||| || || ||| || | | ||| | ||| || || Sbjct 45626866 GGCGAAGGCGACGATGCGCTCGGCGAAAGAG-TCG--GTGGCGTCGATCCAGCGCAAGGC 45626810 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 |||||| ||||| || ||| || |||| ||| | | || || || | ||||| Sbjct 45626809 CCACTGTGCCTTCTTGGCGACGCAGGGGATGGTGTCTACGGCACGGAACAGGTGGTTCTT 45626750 Query 126298 TTCTGATGGA-TCTTTGATGTA 126318 ||| | |||| ||||||||||| Sbjct 45626749 TTC-GGTGGAGTCTTTGATGTA 45626729 >seq9 Length=37469608 Score = 104 bits (114), Expect = 3e-17 Identities = 276/416 (66%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 10820 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAG 10879 ||||| || ||| | ||| || || || ||||||| ||| ||||| | ||||| Sbjct 35454556 TCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAAT 35454615 Query 10880 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATA 10939 |||||||| || ||||| ||||| |||| ||| ||||| | |||||||||| | | Sbjct 35454616 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCTCC---A 35454672 Query 10940 CCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996 ||| || | || | |||| | || || || ||||||||||| | ||||| || || Sbjct 35454673 CCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCAT 35454732 Query 10997 GGTTGATTTTCACGGGCAACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCA 11054 || ||| || ||| |||| || | ||| || |||| ||||| ||||| | Sbjct 35454733 GGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGAACTCGAGAAGCACCAACACCAA 35454790 Query 11055 CAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCC 11113 ||||||| || ||||| | | | | | |||| | || ||||| | |||||| Sbjct 35454791 CAAACATCTCTACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACCT 35454849 Query 11114 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCA 11173 || || || || | || |||||||| || ||||| || | ||||| |||| Sbjct 35454850 GCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCT 35454909 Query 11174 CGTGGGATCCTGGCACCACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCAC 11229 ||| || | || ||| || | | | |||||| | |||||| || ||||| Sbjct 35454910 TTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCAC 35454965 Score = 82.4 bits (90), Expect = 9e-11 Identities = 214/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935 ||| ||||||||||| || | || || || ||||| ||||| | ||||| ||| | Sbjct 4469779 AAACCCATCCATCTCCGTGAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTCCCA-- 4469722 Query 10936 CATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 10993 | | | | ||||| | | ||| | |||||||||||||| ||||| |||||||| || Sbjct 4469721 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCGACGGCGTCAATCTCATCAATGAAAACAATG 4469662 Query 10994 CACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACC 11052 ||||| || ||| | | | ||||| | ||| | || ||| ||||| || || Sbjct 4469661 CACGGCGCCTTATTCTTCGCCTTC-TCAAACAAATCCCTCACCCTCGACGCACCAACCCC 4469603 Query 11053 CACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 11112 |||||||| ||||| || | | || | || || || || || | ||| || Sbjct 4469602 CACAAACAGCTCCACGAACTCTGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTCCCC 4469543 Query 11113 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACC 11172 ||| | || | || || || |||||||| || || ||| ||| | |||| | |||| Sbjct 4469542 CGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGGTGGCCCGACCAGAA-GACACC 4469484 Query 11173 ACGT-GGGATCCTGGCACC 11190 | | || ||| | ||||| Sbjct 4469483 CCTTCGGAATCTTCGCACC 4469465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348313420640