Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 seq7 84.2 2e-11 >seq3 Length=52284309 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || |||||||| || | || || || || || || || ||||| Sbjct 30378636 TGCCACCACGAAGCCTCAAAACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCCG 30378577 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || |||| | ||||| | ||||| ||||| | || | | ||| ||||| | Sbjct 30378576 CCAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGGG 30378517 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| ||| ||| ||| ||| | || || ||||| | | || | Sbjct 30378516 GAATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCA 30378457 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || |||||||||||||| || |||| ||| || ||||| |||||||| Sbjct 30378456 CCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 30378408 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || ||||| || || || ||||| ||||| || || || ||||| Sbjct 30284454 CCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCGCA 30284395 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||| | ||||| || || | || | | ||| ||||| ||| Sbjct 30284394 AGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 30284335 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || ||| ||| ||| ||| | || || || || | | || || Sbjct 30284334 ATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTGTCTGAACTCTCCACC 30284275 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||||||||||||| || |||| ||| || ||||| |||||||| Sbjct 30284274 TCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 30284228 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 || ||||| || ||||| || |||||||| || || || | | | ||||| ||||| Sbjct 30310445 TGGAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30310387 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091 ||| ||||| | || | | ||| || || |||||| || |||||||| ||| || Sbjct 30310386 TTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTT 30310327 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 |||||| ||| | || || ||||| | || || || ||||||||||| || |||| Sbjct 30310326 TGCTTTC-ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTG 30310268 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||| || ||||| || ||||| Sbjct 30310267 TCAGAGTCTTCACAAATATCTGCAT 30310243 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || |||||||| || || || || || ||||| ||||| Sbjct 30378862 CCACCACGAAGCCTCAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCA 30378803 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| | || || ||||| | || | | || ||||| |||| Sbjct 30378802 AGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGA 30378743 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || || |||||| | |||| || Sbjct 30378742 ATCCCCTCTTTGTCCTGTATCTTTGCCTTT-ACATTATCAATGGTATCGGAACTTTCAAC 30378684 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||||||||| || |||| || || |||||||||||||| Sbjct 30378683 CTCCAAAGTAATGGTTTTTCCCGTCAAGGTCTTGACAAAAATTTGCAT 30378636 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || || ||||| || || || || || || || ||||| Sbjct 30379090 CCACCACGAAGTCGCAACACCAAGTGAAGAGTGGATTCCTTCTGGATATTATAATCAGCA 30379031 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| | || || || || | || | | |||||| || ||| Sbjct 30379030 AGGGTACGCCCATCTTCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGT 30378971 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| |||||||| ||| | || || ||||| |||| || Sbjct 30378970 ATGCCTTCCTTGTCCTGAATCTTTGCTTTC-ACATTGTCAATTGTATCAGAGCTTTCCAC 30378912 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| || ||||||||||| || ||||| |||||||| Sbjct 30378911 CTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATTTGCAT 30378864 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 || ||||| || || || || |||||||| || || || | | | ||||| ||||| Sbjct 30275242 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30275184 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091 ||| ||||| | || | | ||| || || |||||| || |||||||| ||| || Sbjct 30275183 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTT 30275124 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 |||||| ||| | || || ||||| | || || || ||||||||||| || |||| Sbjct 30275123 TGCTTTC-ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTG 30275065 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||| || ||||| || ||||| Sbjct 30275064 TCAGAGTCTTCACAAATATCTGCAT 30275040 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 || ||||| || || || || |||||||| || || || | | | ||||| ||||| Sbjct 30315184 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGG-TGCGACCATCTTCCAATTG 30315126 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091 ||| ||||| | || | | ||| || || ||| || || |||||||| ||| || Sbjct 30315125 TTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTT 30315066 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 |||||| ||| | || || ||||| | || || || |||||||||||||| |||| Sbjct 30315065 TGCTTTC-ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTG 30315007 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||| || ||||| || ||||| Sbjct 30315006 TCAGAGTCTTCACAAATATCTGCAT 30314982 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || ||||| || || || || || || || || ||||| ||||| Sbjct 30274813 TGCCACCCCGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCG 30274754 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || |||| ||||||| | ||||| ||||| | || | | ||| || || | Sbjct 30274753 CAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAG 30274694 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || |||||||| ||| ||| || ||| | || || ||||| | | || | Sbjct 30274693 GGATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCA 30274634 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || ||||| ||||| || || || | ||| || |||||||||||||| Sbjct 30274633 CCTCCAAGGTTATGGTCTTTCCAGTTAAAGTCTTCACAAAAATTTGCAT 30274585 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || ||||| || || ||||| || || || ||||| ||||| Sbjct 30310241 CCACCACGAAGCCTCAACACTAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCA 30310182 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| | || || ||||| |||| | | ||| ||||| ||| Sbjct 30310181 AGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGG 30310122 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || ||||| || ||||| || Sbjct 30310121 ATGCCTTCCTTGTCCTGAATCTTTGCCTTA-ACATTATCAATAGTGTCAGAGTTTTCAAC 30310063 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || || || | ||| || |||||||||||||| Sbjct 30310062 CTCCAAAGTTATAGTCTTCCCAGTTAAAGTCTTCACAAAAATTTGCAT 30310015 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || | || || || || || || || ||||| ||||| Sbjct 30284682 CCACCACGAAGCCTCAACACCAGGTGCAGAGTGGATTCCTTCTGGATGTTATAATCAGCA 30284623 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| | || || ||||| | || | | |||||| || ||| Sbjct 30284622 AGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGTTGATCTGGTGGT 30284563 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || || || | |||| || Sbjct 30284562 ATGCCTTCCTTGTCCTGAATCTTTGCCTTC-ACATTATCGATGGTGTCAGAACTTTCAAC 30284504 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || ||||||| || ||||||||||||||||| Sbjct 30284503 CTCCAAAGTAATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCAT 30284456 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| |||||||| ||||| | || | | ||| || || ||| || ||||| ||| Sbjct 30284838 TCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTG 30284779 Query 15082 TCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 || ||| |||||||| ||| | || || ||||| | || || || |||||||| Sbjct 30284778 TCCTGAATCTTTGCTTTC-ACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAAT 30284720 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||| ||||||||||| || ||||| || ||||| Sbjct 30284719 GGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 30284684 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || ||||| || || ||||| || || || ||||| ||||| Sbjct 30275038 CCACCGCGAAGCCTCAACACTAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCA 30274979 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| | || || ||||| |||| | | ||| ||||| ||| Sbjct 30274978 AGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGG 30274919 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || ||||| || |||| || Sbjct 30274918 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTCACATTATCAATAGTGTCAGAGCTTTCAAC 30274860 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || | | | || || | |||||| |||||||||||||| Sbjct 30274859 CTCCAAAGTTATAG-TCTCCCAGTTAAAGTTTTCACAAAAATTTGCAT 30274813 >seq7 Length=51758522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | | ||||| |||||||| || || ||||| |||||||| ||| Sbjct 4236754 TGCCACCACGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTTTGAATGTTGTAGTCGG 4236695 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | | || || | || || |||||| | || | ||| || ||||| | Sbjct 4236694 CGAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGG 4236635 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | |||||||||||||| || ||| || || | || ||||| ||| | || | Sbjct 4236634 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGA 4236575 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || ||||| || || ||||| || || || || || ||||| Sbjct 4236574 CCTCGAGAGTGATGGTCTTTCCGGTCAGTGTCTTAACGAAGATCTGCAT 4236526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357388916153780