Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 172 9e-38 >seq1 Length=52205531 Score = 172 bits (190), Expect = 9e-38 Identities = 559/859 (65%), Gaps = 23/859 (3%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | | ||| ||||||||| ||||||||||| |||| || || || Sbjct 19482296 CTTCTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATAAG 19482355 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| | |||| ||||||| ||| | || ||||| | || || || | || Sbjct 19482356 CTCCATCCAATCGAACGGGTTCTGCACATTGTACAGCTTCCCGCACCCAAGCGCACCGAG 19482415 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA- 159806 |||||| || || ||||| || ||||| || |||| | | ||| ||||||| || Sbjct 19482416 CAACCTATCAGCAACAAACTCAATGTACACACTCATCAAGGCCCCGTTCATCCCCACCAA 19482475 Query 159807 -GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || || || ||||| || | | ||||||| |||| || || || || ||| ||| Sbjct 19482476 CGCGCAA--GGAAGCGCGTCGCAGACAAACTCCCTCTCGATGTCAACTGCATCGCGCACG 19482533 Query 159866 ATCTGCGAGACACGTTCGTACCCCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGG 159922 |||| | || || || | ||||| | || || || | || ||| Sbjct 19482534 ATCTCCCTCACGCGCTCCTCGGGGAGCTTGTTCCGCATGATAGAGT------AGAGCAGG 19482587 Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 ||||| ||||||||||| || |||||||| || ||||||| |||||||| | | | || Sbjct 19482588 CACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGT 19482647 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAA 160041 |||||||||| || ||| |||||||| || || | |||||||| ||| || || Sbjct 19482648 CCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAG-AGCAAAAGCTTCCGGAGAAGAA 19482706 Query 160042 GATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATG 160101 ||| ||||| ||| || || || |||| | ||| | || || || || ||| Sbjct 19482707 GATTCCCTCGACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGTC--- 19482763 Query 160102 GGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTT 160161 | |||| | | |||||| | ||||||||| | || ||| || || || | ||||| Sbjct 19482764 GATCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGTG 19482823 Query 160162 AAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACAT 160221 || | | | || ||| || || || || || ||| || |||||| Sbjct 19482824 GAAGAGACGGGTCTTCTCTTTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCTGTACAT 19482883 Query 160222 TTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGAT 160280 || | ||| | || |||||||| ||||||||| |||||| ||||| ||| Sbjct 19482884 CTCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCCTCGGAGA- 19482942 Query 160281 ACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCG 160340 ||| ||||||| |||| | | || || || || | || |||| ||| | Sbjct 19482943 CCTGGACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCCATCGGAGGCGG 19483002 Query 160341 CAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCC 160400 | ||||| || | ||||| | ||||||||| | |||| | | | | || || |||| Sbjct 19483003 CGAAGAAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAGAGTC---TCCC 19483059 Query 160401 AGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAG 160460 | || | ||| || | | || ||||| ||||| |||| | || | ||| Sbjct 19483060 AATGCCGGATGTCCTGCGAGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCAGCTT 19483119 Query 160461 TTTTGTACATGGCCCAGAT 160479 | |||||||| ||||||| Sbjct 19483120 TCTTGTACATTTCCCAGAT 19483138 Score = 136 bits (150), Expect = 6e-27 Identities = 515/799 (64%), Gaps = 17/799 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||| || || |||||||| || |||| | ||||| ||||| | | || || || Sbjct 45627271 CTTTTCAAAGAAGTTGGTTTTCCCCTGGAGTGATATAAGCTCCATCCAATCAAAGGGATT 45627212 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || || | || |||| | | || || || ||||||||| || || ||||| || Sbjct 45627211 CTGAACATCGTACACCTTCCCACACCCAAGCGCACCCAGCAACCGATCCGCAACAAACTC 45627152 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA--GCCTAACGGGGAGCGCTTCC 159826 || || || |||| |||| | || || |||| || || | ||| ||||| || Sbjct 45627151 AATATACTGACTCATCAGCTCCCCATTCATACCCACCAAAGCGCA--GGGAAGCGCGTCG 45627094 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886 ||| ||| ||| |||| || || ||||| ||| |||||||| | || || || | Sbjct 45627093 CACACAAATTCCCTCTCTATGTCAACCGCGTCGCGCACAATCTCCTTCACGCGCTCCTCA 45627034 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 |||| | || || ||| ||||||||| ||||||||||| || || Sbjct 45627033 GTGAGCTT---CTTTCTGAGGAGAGAGTACAAGAGGCACGCGAAGTCGCAGTGAAGCCCT 45626977 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 || || || || |||| |||||||| | | |||| || ||||| | || ||| ||| Sbjct 45626976 TCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAACCGCGCTTCTTG 45626917 Query 160007 AGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || || | ||| |||| || || ||||| ||||| ||| || || || Sbjct 45626916 AGCCAGAATATCG-AGCAGAAGCTGCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAGGC 45626858 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 |||| | ||| | |||||| || ||| ||| | |||| | |||||| | || Sbjct 45626857 GACGATGCGCTCGGCGAAAGAGTCGGTGGCGTC---GATCCAGCGCAAGGCCCACTGTGC 45626801 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCAC 160185 |||||| |||| ||| || ||| || ||||| |||| || || || | Sbjct 45626800 CTTCTTGGCGACGCAGGGGATGGTGTCTACGGCACGGAACAGGTGGTTCTTTTCGGTGGA 45626741 Query 160186 ATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGC 160245 || ||||| || | | || |||||| || | ||| | || |||||||| Sbjct 45626740 GTCTTTGATGTAGGTTTCCAAGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGC 45626681 Query 160246 CATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTTT 160304 ||||| ||| ||||||| |||| | || || || | |||| |||| | Sbjct 45626680 GATCTGGAAGCCGTAGAAAGCACGGGCCT-CGGAGACTTGGATTTCCTTCATGAAGCGGG 45626622 Query 160305 GACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGA 160364 | || || | ||| | ||||||| ||| |||||||| || | ||||| | || Sbjct 45626621 CGGCGAGGTTTTCGAGAACGATACCGTCGGAGGCGGCAAAGAAGGCGAGGACGTGGGTGA 45626562 Query 160365 TGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAAT 160424 |||| || | |||| | | | |||| |||||||| | |||||||| | | Sbjct 45626561 TGAAGTGGCGCTCGCCGTCGGTGAG---GGAGTCCCAGTGGCGGAGGTCTTGGGAAAGGT 45626505 Query 160425 CAACCTCTTCCGCGCTCCA 160443 |||||||||| ||| |||| Sbjct 45626504 CAACCTCTTCGGCGGTCCA 45626486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148162876480