Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 >seq3 Length=52284309 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || ||||| || || ||||| ||| |||| |||||||||||||| |||| Sbjct 30284875 TTCCTTCTGAATATTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAA 30284816 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||| | | ||||||||| | || | |||||||||||| || ||| ||| | | Sbjct 30284815 AATAAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCCTGAATCTTTGCTTTCACATT 30284756 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||| || | ||| ||||| ||||| ||||| ||||| || || | ||| || || Sbjct 30284755 ATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCAC 30284696 Query 39708 GAAGATCTGCAT 39719 || |||||||| Sbjct 30284695 AAATATCTGCAT 30284684 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || || || || || ||||| ||| |||| |||||||||||||| |||| Sbjct 30315173 TTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAA 30315114 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||| | | ||||||||| | || | ||| || ||||| || ||| ||| | | Sbjct 30315113 AATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 30315054 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||| || | ||| ||||| ||||| ||||| ||||| || || | ||| || || Sbjct 30315053 ATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCAC 30314994 Query 39708 GAAGATCTGCAT 39719 || |||||||| Sbjct 30314993 AAATATCTGCAT 30314982 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || || || || || ||||| ||| |||| |||||||||||||| |||| Sbjct 30275231 TTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAA 30275172 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||| | | ||||||||| | || | ||| || ||||| || ||| ||| | | Sbjct 30275171 AATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTCACATT 30275112 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||| || | ||| ||||| ||||| ||||| || || || || | ||| || || Sbjct 30275111 ATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCAC 30275052 Query 39708 GAAGATCTGCAT 39719 || |||||||| Sbjct 30275051 AAATATCTGCAT 30275040 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 |||||| || || || || || ||||| ||| |||| ||||||||||| || |||| Sbjct 30310434 TTCTTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTACCAGCAAA 30310375 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||| | | ||||||||| | || | ||| || ||||| || ||| ||| | | Sbjct 30310374 AATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 30310315 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||| || | ||| ||||| ||||| ||||| || || || || | ||| || || Sbjct 30310314 ATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCAC 30310255 Query 39708 GAAGATCTGCAT 39719 || |||||||| Sbjct 30310254 AAATATCTGCAT 30310243 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 ||||| |||| ||| |||||| || ||||||||||| || | | | |||| || Sbjct 30284436 ACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCGCAAGGGTTCTTCCATCTTCA 30284377 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | ||||||||| |||| || | | |||||| || | ||| | || || || || Sbjct 30284376 AGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 30284317 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 || || ||| | | | | ||||||| || ||||| ||||| ||||| ||||| Sbjct 30284316 ATCTTGGCTTTCACATTATCAATGGTGTCTGAACTCTCCACCTCCAAGGTAATGGTTTTC 30284257 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || ||||| || || ||||| |||||| Sbjct 30284256 CCGGTCAAAGTCTTGACAAAGATTTGCATG 30284227 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 |||| ||||| || | |||| ||| || || ||||||||||| || | || || Sbjct 30379078 CGCAACACCAAGTGAAGAGTGGATTCCTTCTGGATATTATAATCAGCAAGGGTACGCCCA 30379019 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||| || || ||| |||| || | | ||| ||||| | |||| |||||| ||| Sbjct 30379018 TCTTCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTG 30378959 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || || ||| ||| | | | | ||| || | ||||||||| ||||| ||||| Sbjct 30378958 TCCTGAATCTTTGCTTTCACATTGTCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATG 30378899 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || | ||| || || || || ||||| Sbjct 30378898 GTCTTTCCTGTCAGAGTCTTCACAAATATTTGCAT 30378864 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || || ||||||||| || || || ||||||||||| |||| | | |||| || Sbjct 30378616 ACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCCGCCAGGGTTCTTCCATCTTCA 30378557 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | |||||||| |||| || | | |||||| || | ||| | || || ||||| Sbjct 30378556 AGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 30378497 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 || || ||| | | | | || |||| || ||||| ||||| ||||| ||||| Sbjct 30378496 ATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTTTTC 30378437 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || ||||| || || ||||| |||||| Sbjct 30378436 CCGGTCAAAGTCTTGACAAAGATTTGCATG 30378407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347366602634564