Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq9 138 1e-27 seq2 131 2e-25 seq1 127 3e-24 >seq9 Length=37469608 Score = 138 bits (152), Expect = 1e-27 Identities = 288/423 (68%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||| | | || || || || ||||||| ||||| || | ||||| Sbjct 35454555 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 35454614 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 |||||||| ||||||||||| ||||| | || ||||| | |||||||||| || Sbjct 35454615 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 35454671 Query 16037 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 |||| |||| || | |||| |||| || |||||||| ||||||| || || ||||| Sbjct 35454672 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 35454731 Query 16094 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 ||| ||| || || |||| || | ||| || || || || || |||||| Sbjct 35454732 TGGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGAACTCGAGAAGCACCAACACCA 35454789 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||| ||||| | | | | | |||| | || |||||| | |||||| Sbjct 35454790 ACAAACATCTCTACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACC 35454848 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 35454849 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 35454908 Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330 | ||| || || ||| || | |||||||||| | |||||||| ||||| | Sbjct 35454909 TTTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCACCAC 35454968 Query 16331 CTC 16333 ||| Sbjct 35454969 CTC 35454971 Score = 102 bits (112), Expect = 1e-16 Identities = 249/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| || | |||||||||||| || ||||||| ||||| ||| | Sbjct 4469779 AAACCCATCCATCTCCGTGAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTCCC--A 4469722 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | || || | | ||| | || ||||| ||||||||||||||||| || ||| Sbjct 4469721 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCGACGGCGTCAATCTCATCAATGAAAACAATG 4469662 Query 16092 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || || || | ||||| | ||||| | ||||| || | | || || || Sbjct 4469661 CACGGCGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 4469606 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| |||||| || | || || | || || || || || | ||| Sbjct 4469605 CCCCACAAACAGCTCCACGAACTCTGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 4469546 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||||| | || | || ||||| ||||| || || || || | |||| || | | Sbjct 4469545 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGG-TGGCCCGACCAGAAGAC 4469487 Query 16268 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 4469486 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 4469427 Query 16327 CAATCTCTTCCA 16338 ||| ||||| || Sbjct 4469426 CAACCTCTTGCA 4469415 >seq2 Length=49040938 Score = 131 bits (144), Expect = 2e-25 Identities = 309/461 (67%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| ||||| | | || ||||| || ||||||| ||||| || | |||||| Sbjct 34691625 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 34691566 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || || || | |||||||||| || | Sbjct 34691565 CCATCCATTTCTGTCAAAAGTTGGTTCAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 34691509 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 34691508 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 34691449 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||| || || |||| || | ||| || || || || || ||||||| Sbjct 34691448 GGGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 34691391 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | | | | |||| | ||||| ||| || |||||| Sbjct 34691390 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAAGGGAACACCAGCTTCACCA 34691332 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 34691331 GCAATAGCCTTGGCTAACAGGGTCTTTCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 34691272 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 || || || ||| || | | |||||||| | ||| ||||| ||||| | | Sbjct 34691271 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTTAGAAACTCCACCACC 34691212 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | ||||| | || | ||| ||||||| Sbjct 34691211 TCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 34691171 >seq1 Length=52205531 Score = 127 bits (140), Expect = 3e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| || | || || || || || ||||| ||||||||||| || | Sbjct 19482751 TCCTTCGCCGAGCGCATCGTTGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGAAGC 19482692 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| |||| | ||||||||||||||||| |||||||| || || |||||||||| Sbjct 19482691 TTTTGCTCTATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGACTTACCTTCTCCAAC 19482632 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || ||||| || |||||||| |||||| Sbjct 19482631 GAACTCATCTCCCGCGACGAGGGGCTCCAC 19482602 Score = 113 bits (124), Expect = 6e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 || || || ||||| || |||| || || || || ||||| |||||||||||||| | Sbjct 45626837 TCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGCAGC 45626896 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| | || | |||||||||||||| ||| | ||||| |||||| |||||||||| Sbjct 45626897 TTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGATGCCCGGTCTCACCTTCTCCAAC 45626956 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || || || || || || || || ||| Sbjct 45626957 GAACTCATATCGCGAGATGAAGGGCTTCAC 45626986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620736906429760