Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9 149 7e-31 seq2 136 5e-27 seq1 118 1e-21 seq7 82.4 9e-11 >seq9 Length=37469608 Score = 149 bits (164), Expect = 7e-31 Identities = 288/421 (68%), Gaps = 8/421 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9283 |||||| || ||| | | || || || || ||||||| ||||| || | | ||||| Sbjct 35454555 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 35454614 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || Sbjct 35454615 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 35454671 Query 9344 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 |||| |||| || | |||| |||| || |||||||| ||||||| || ||||| || Sbjct 35454672 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 35454731 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 ||| ||| || ||| | | || | ||||||||| | || || |||||||| Sbjct 35454732 TGGAGCATTCTCTTTGGCCTTCTTGAATAAATCGCGAACTCGAGAAGCACCAACACCAAC 35454791 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9519 ||||||||| ||||| | | | | | |||| | || |||||| | |||||| | Sbjct 35454792 AAACATCTCTACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACCTG 35454850 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCC 9579 |||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 35454851 CAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTT 35454910 Query 9580 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCT 9639 ||| || || ||| || | |||||||||| | || ||||| ||||| | || Sbjct 35454911 TTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCACCACCT 35454970 Query 9640 C 9640 | Sbjct 35454971 C 35454971 Score = 102 bits (112), Expect = 1e-16 Identities = 249/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||| || | ||| |||||||| || ||||||| ||||| ||| | Sbjct 4469779 AAACCCATCCATCTCCGTGAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTCCC--A 4469722 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | | | || || | | ||| | || ||||| ||||||||||||||||| ||||| Sbjct 4469721 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCGACGGCGTCAATCTCATCAATGAAAACAATG 4469662 Query 9399 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || || || | ||| || | ||||| | ||| | ||||| || || || Sbjct 4469661 CACGGCGCCTTATTCTTC----GCCTTCTCAAACAAATCCCTCACCCTCGACGCACCAAC 4469606 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 || ||||||| |||||| || | || || | || || || || || | ||| Sbjct 4469605 CCCCACAAACAGCTCCACGAACTCTGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 4469546 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||||| | || | || ||||| ||||| || || || || | |||| || | | Sbjct 4469545 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGG-TGGCCCGACCAGAAGAC 4469487 Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 ||||| | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 4469486 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 4469427 Query 9634 CAATCTCTTCCA 9645 ||| ||||| || Sbjct 4469426 CAACCTCTTGCA 4469415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || || || || || ||||||||||| || ||||| | ||| || ||||| | ||| Sbjct 17262578 TGAGGCCTAGGAGTTCCAGCATTGAAAAGTGTTGGAGATGCATGGGTGAACCATCGTTGA 17262519 Query 107228 GACATCTTGTCGTATG-TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| ||| ||| | ||| || |||| || ||||| ||| ||| || || | || Sbjct 17262518 GACATCATGTGGTAAGTTCTGACAG-CAGATTCTATGTCATCCTTGTGAATCCCAACCGC 17262460 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA-- 107344 || | ||| ||||||| |||||| ||| || | |||| | || || || |||| Sbjct 17262459 GACTCTCATCAACATGTGTTGGGGCCTTT-CAACAACCTGCCCTTGAACC-TTCAAGAGG 17262402 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 || | |||| |||||||||| ||||| ||| || | ||| |||||| Sbjct 17262401 TAAGACCTCTCGAGGGTTTTGAACCCAAAATAATCATAGTCAAAGTCCC 17262353 >seq2 Length=49040938 Score = 136 bits (150), Expect = 5e-27 Identities = 308/459 (67%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| ||||| | | || || || || ||||||| ||||| || | | |||||| Sbjct 34691625 TCAAGAATATCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 34691566 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 34691565 CCATCCATTTCTGTCAAAAGTTGGTTCAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 34691509 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| |||| || |||||||| ||||||| |||||||| || Sbjct 34691508 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 34691449 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || ||| | | || | ||| ||||| | || || ||||||||| Sbjct 34691448 GGGGCATTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACA 34691389 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| | ||||| ||| || |||||| || Sbjct 34691388 AACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAAGGGAACACCAGCTTCACCAGC 34691330 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || ||| | || ||||| || || ||||| ||| | || || | || Sbjct 34691329 AATAGCCTTGGCTAACAGGGTCTTTCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTT 34691270 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || || || ||| || | | |||||||| | ||| ||||| ||||| | ||| Sbjct 34691269 AGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTTAGAAACTCCACCACCTC 34691210 Query 9641 TTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | ||||| | || | ||| ||||||| Sbjct 34691209 CATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 34691171 >seq1 Length=52205531 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || ||||| || ||||| || |||||| || || |||||||| || Sbjct 19482602 GTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGTCCCGGCATGAGGCC 19482661 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | |||| ||| || |||||||||||||| ||||| || || Sbjct 19482662 TCGCTTCTTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCGACGCA 19482721 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || || |||| | ||||||||||||||| Sbjct 19482722 GGCGAAGGCAACGATGCGCTCGGCGAAGGA 19482751 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || || |||||||| || || ||||| || |||||| || || ||||| | ||| Sbjct 45626986 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAACC 45626927 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | |||||| || ||||||||||| ||||| || || Sbjct 45626926 GCGCTTCTTGAGCCAGAATATCGAGCAGAAGCTGCCAGAGAAGAAGATTCCCTCGACGCA 45626867 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 || || || | | |||||||||||| ||| Sbjct 45626866 GGCGAAGGCGACGATGCGCTCGGCGAAAGAG 45626836 >seq7 Length=51758522 Score = 82.4 bits (90), Expect = 9e-11 Identities = 134/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||||| ||| || || || ||||||||||||| ||| || ||| | || Sbjct 12793038 ACATATCATGGTAGTGCAATGGATGCCAAATTGCGCACATTAGTTTCAGTTGGACTTGAA 12793097 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||||| ||||||||||| || ||||| || |||||||||| |||||| Sbjct 12793098 TACTCAATTATTTCAGTACACAAGTTTGACGATTTAATTGTGCCCAAATTCTGTTGGTTG 12793157 Query 106568 CTCTTTTTGTTGCACGCATCCTT--GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625 || || || ||||| | |||||| | |||||||| || || | || |||||| Sbjct 12793158 CTTTTCTTATTGCAAGTATCCTTAAAAAAAGCATGTAAGG-GTTTCGGTTAATATCTGTG 12793216 Query 106626 ACTTGAGAATT 106636 | || |||||| Sbjct 12793217 ATTTCAGAATT 12793227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975578669920