Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq6 203 4e-47 seq9 178 1e-39 seq7 149 7e-31 seq2 138 1e-27 seq1 131 2e-25 seq8 116 4e-21 >seq6 Length=31977256 Score = 203 bits (224), Expect = 4e-47 Identities = 483/723 (67%), Gaps = 23/723 (3%) Strand=Plus/Plus Query 169588 TGGTCTCTGGAACTTTGTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAG 169647 |||| | |||| ||||| | || |||||||| |||| ||| || ||| |||| | Sbjct 21888298 TGGTATGTGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACA 21888357 Query 169648 GCAGTTTGAATTGGCACGTCTTATTGGCATCCGTCCTTATAATGCT---ATTGCATTCTC 169704 || | |||| | || | || || | | ||||||||| | ||||||||||| Sbjct 21888358 TCAATCTGAACTTGCTCAATTTTTTCAATTACAACCTTATAATAATGTAATTGCATTCTC 21888417 Query 169705 TGGTCCTATTGCTGTATTTGTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATG 169764 ||||| |||| | | ||||| ||| || ||||| || ||||| || |||| || Sbjct 21888418 AGGTCCAATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTG 21888477 Query 169765 GTTCTTTGCTCCCTCCTTTGGAGTATCAGC-AATCTTCAGGT--TCCTGTTGTTCCTGCA 169821 ||||||||||| ||| | | |||| ||| |||| | || | || ||| || Sbjct 21888478 ATTCTTTGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTC---CA 21888534 Query 169822 AGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGG 169881 | |||| || | ||||| || || ||||| || ||| |||| || | | ||||| Sbjct 21888535 AAGATTTCATACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTATTGGG 21888594 Query 169882 CGGAGCATTGCTTTCTGCTATCCATGGTGTTACAGTAGAGAACACATTGTATGAAGACGG 169941 | ||| | || | ||||| ||||||| || ||||| | || || | |||||| || Sbjct 21888595 TGTTGCACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGG 21888654 Query 169942 TGAGCAGGCAAATACTTTCAAGGCGTTTGATTCGACACAGGAAG-AAGAGACTTATTCTA 170000 ||| | |||||| || || ||| | | || || | || | || ||||| | Sbjct 21888655 TGATGGTGAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAA 21888714 Query 170001 TGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTT-TCTAACAAGCGT 170059 || | |||| || ||||| ||||| || ||||| || ||| ||| ||||| |||| | Sbjct 21888715 TGATTACTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCAT 21888774 Query 170060 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGC 170119 ||| | ||||| || ||||||||||| || || | || | || | | |||| Sbjct 21888775 TGGTTACATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGG 21888834 Query 170120 ATTATTGG-CCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGC 170178 || |||| | | || | || || |||||||| |||||||| ||| || ||| | || Sbjct 21888835 ATAGTTGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGC 21888893 Query 170179 AGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACT 170238 | || |||| |||| || ||||| ||||| || | || || ||||| | Sbjct 21888894 AATAG----------ATTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTAT 21888943 Query 170239 TCGTGCATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGT 170298 |||||||||| || || || |||| | ||||||||||| || |||| ||||| || Sbjct 21888944 TCGTGCATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGT 21889003 Query 170299 TCT 170301 ||| Sbjct 21889004 TCT 21889006 >seq9 Length=37469608 Score = 178 bits (196), Expect = 1e-39 Identities = 361/528 (68%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 167910 GTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCT 167968 ||| || || |||||||||| | | |||| | ||||| | ||| || || |||| | Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 167969 TCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCA 168028 | ||| ||| || || ||||| | || || || | || || || ||| || || Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 168029 TGTATGGTAACAACATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTC 168088 | ||||| ||||| ||||| |||||||| | | | | ||| | ||||| | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 168089 ACTTCTATCCCATCTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTT 168148 | || ||||| || ||||||| | | | ||||| || | || |||| ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 168149 TCCAACTAGTAGTCTTTCACTTCCT-CATCG-GTATCTATGCATACATGGGACGTGAATG 168206 ||||| | || | || ||| | | | | ||| || ||| |||||||| |||||||| Sbjct 1918000 ATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCT-TGC-TACATGGGTCGTGAATG 1918057 Query 168207 GGAACTTTCATATCGTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGT 168266 ||||||| | |||||| ||||||| || ||||| ||||||||| || | || | Sbjct 1918058 GGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTGA 1918117 Query 168267 CGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGC 168326 || || | | || || ||| | | |||||| | |||||||| || || || |||| Sbjct 1918118 TGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGG 1918177 Query 168327 AATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAA 168386 |||||| | ||||| | || || ||||| | ||| | || || || |||||| || Sbjct 1918178 AATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAA 1918237 Query 168387 TATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGG 168434 |||||| ||||||| || || || | | || |||| |||||||| Sbjct 1918238 TATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGG 1918285 >seq7 Length=51758522 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 168190 TACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTATGCGTCCATGGATCTGTGTT 168249 |||||||| |||||||| |||||| | |||| | ||||||||||| ||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 168250 GCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTTTCGGTCAA 168309 ||||| || || || || || || || | ||| || ||| | | |||||| | |||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 168310 GGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTC 168369 || || || || |||| ||||| | ||||| || || || ||||| | ||| | || Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 168370 TTCCAAGCTGAGCACAATATTCTCATGCATCCCTT 168404 || || |||||||| |||||||| |||||||| || Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq2 Length=49040938 Score = 138 bits (152), Expect = 1e-27 Identities = 234/336 (70%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 169986 AAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGT 170045 |||| |||||||| ||||| ||| || ||||| ||||| || ||||| || |||| | Sbjct 27893024 AAGAAACTTATTCAATGGTA--TGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTT 27893081 Query 170046 TTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGA 170105 |||| || | ||||| || ||||| ||||| || || || ||| | |||| Sbjct 27893082 TTTCCAATTA----------CATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGA 27893131 Query 170106 CATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT-CGTGCTTACGATTTCGTGAGT 170164 || || | || | || || || | ||| |||||||| |||||||| | Sbjct 27893132 TGAGTGCTCTTAGGATAGTCGGTTAGGC-CTTGACCTTACGTGCTTATGATTTCGTTTCT 27893190 Query 170165 CAGGAGATCA-GAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCT 170223 || || || | ||||| |||||||| |||||||| | || ||||||||||| || || Sbjct 27893191 CAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCT 27893250 Query 170224 ATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCAT 170283 || || ||||| |||||| ||| | ||| || ||||| | ||||||||| | || Sbjct 27893251 CTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTAT 27893310 Query 170284 CTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 ||||| || || ||||| || | |||||||| || Sbjct 27893311 ATTCCCTGAGGAGGTTCTACCACGTGGTAACGCTCT 27893346 >seq1 Length=52205531 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 170015 CGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTC 170074 ||||| ||||| || ||||| || |||| ||||| || || |||||| | ||||| || Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 170075 ATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCT 170134 ||||| ||||| || || | ||| | |||| || |||| | | || | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 170135 CTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAA 170194 || || | |||||||| |||||||| ||| || ||| | ||||| |||||||| ||| Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 170195 TTTGAGACCTTCTACACCAAAAACATCCTATT 170226 |||||||| |||||||||||||| || || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCTCTT 38350292 >seq8 Length=59662532 Score = 116 bits (128), Expect = 4e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 168710 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 168769 |||| || |||||||| ||| | ||||| |||| |||||||| | || |||||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 168770 ATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 168829 || || | ||||| ||| || ||||||||||| |||||||| ||||| || || || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 168830 TCCCACTCGATCTTGCTGC 168848 |||| || ||||| ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 Score = 105 bits (116), Expect = 8e-18 Identities = 178/258 (69%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 169997 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAG 170056 || ||||| ||||| || ||||| ||||| || ||||| || |||| ||| Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTT--------- 1232821 Query 170057 CGTTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATT 170116 | |||| | ||||| || ||||| ||||| || || | ||| | || | || || Sbjct 1232820 CATTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 170117 GGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGA 170176 || | | || | || | || | ||||||| |||||||| ||| || ||| | Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 170177 GCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGA 170236 ||||| ||| |||| ||||||||||| ||| ||| |||||| || || || || |||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTCTCTTAAA--AAGGT 1232643 Query 170237 CTTCGTGCATGGTTGGCA 170254 ||||||| ||| ||||| Sbjct 1232642 ATTCGTGCGTGGATGGCA 1232625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574468515908640