Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq6 239 5e-58 seq9 167 3e-36 seq2 158 1e-33 seq7 136 4e-27 seq8 132 5e-26 seq1 131 2e-25 seq4 114 1e-20 >seq6 Length=31977256 Score = 239 bits (264), Expect = 5e-58 Identities = 431/620 (70%), Gaps = 20/620 (3%) Strand=Plus/Plus Query 165575 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 165634 |||| ||||| ||||| ||||| || | | |||||||| || || || || || || Sbjct 21888401 AATGTAATTGCATTCTCAGGTCCAATTGTTATTTTTGTTTATGTATTCCTTATTTATCCA 21888460 Query 165635 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGC-AATCTTCAGGTT 165693 |||||||| | |||| || || ||||| ||| | ||||| ||| |||| | Sbjct 21888461 CTGGGTCAGTTTGGTTGATTCTTTGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAAT- 21888519 Query 165694 CCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGT 165753 | | | || | ||| |||| |||| ||||| || || || ||||||||| |||| || Sbjct 21888520 CATCATATTTTTCCAAAGATTTCATACTTGGACATTAAACCCATTTCATATGCTGGGAGT 21888579 Query 165754 TG-CAG-GTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAAT 165811 || || |||| |||||| |||| | || | || || ||||||| || ||||| | | Sbjct 21888580 TGTCATTGTAT--TGGGTGTTGCACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGT 21888637 Query 165812 ACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTACTCAAGAG 165871 ||| | | | |||||||||| | || |||||| || || ||| || | || ||| Sbjct 21888638 ACTTTATTTGAAGATGGTGATGGTGAAAATACATTTTGTGCTTTTAACCCAACCCAACCC 21888697 Query 165872 GAAGAAA-CCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGC 165930 ||| ||| |||| |||||| |||||| || || || ||||| || ||||| || ||| Sbjct 21888698 GAAAAAAACCTATTCAATGATTACTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGT 21888757 Query 165931 GTTTAG-TAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTT 165989 ||| ||||||| ||||| ||||| |||||| ||||||| || || | || | | Sbjct 21888758 TTTTCTCTAATAAGCATTGGTTACATTTATTTATGTTGTTTGTACCAGTAACTCGTTTAT 21888817 Query 165990 GGACAAGTTCCATCGGTATTATTGGT-CTTGCTCTCAACCTTCGTGCTTATGACTTTGTA 166048 | | ||| | || || ||||| | | || | ||||| ||||||||||| || || Sbjct 21888818 GAATGAGTGTTCTTGGGATAGTTGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTT 21888876 Query 166049 TCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATT 166108 || ||||| ||| | ||| ||| ||| | || || ||||| ||||| ||| Sbjct 21888877 TCTCAAGAAATCTGTGCAATAGA----------TTTAAGACTTTATACACTAAAAATATT 21888926 Query 166109 CTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTT 166168 |||| || |||||| ||||||| ||| || || | |||| | ||||| |||||| Sbjct 21888927 TTCTTAAACGAAGGTATTCGTGCATGGATGACAACTCAAAATCAGTCTCATGAAAACTTT 21888986 Query 166169 GTCTTCCCTGAAGAAGTTCT 166188 | |||| |||||| ||||| Sbjct 21888987 ATATTCCTTGAAGAGGTTCT 21889006 >seq9 Length=37469608 Score = 167 bits (184), Expect = 3e-36 Identities = 499/762 (65%), Gaps = 26/762 (3%) Strand=Plus/Plus Query 163832 GTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCT 163890 ||| || ||| ||||||| |||| || | | |||| | ||| || || |||| | Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 163891 TCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCA 163950 | ||| ||| || || ||||| | |||||||||| || |||||| || || || Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 163951 TGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTC 164010 | ||||| ||||| ||||| |||||||| | ||| | | || || | | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 164011 ACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTT 164070 | || || || || ||||||| | | |||||||||| || ||||||| ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 164071 TCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTG 164128 |||| | || | || ||| | | || | || ||| |||||||||||||| || Sbjct 1918000 ATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCT-TGC-TACATGGGTCGTGAATG 1918057 Query 164129 GGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGT 164188 |||||| | ||| | ||||||| || ||||||| |||||| || || | || | Sbjct 1918058 GGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTGA 1918117 Query 164189 TGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGC 164248 |||||| | | || ||| || |||||||| | |||||||| || || || | Sbjct 1918118 TGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGG 1918177 Query 164249 AATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAA 164308 |||||| | || || | ||| || ||||| | ||| | || || || ||||| || Sbjct 1918178 AATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAA 1918237 Query 164309 CATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTT 164368 || || ||||| | || || || | | || |||| ||||||||| || || || Sbjct 1918238 TATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTATT 1918297 Query 164369 CAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGA 164428 |||||| || | | ||| | || ||| ||| | | | || ||| Sbjct 1918298 CAGTGCTATAAATGATTCCTTAGTAACT--TTC-----TACCTTAA-----------TGA 1918339 Query 164429 GTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGC 164488 || || | |||||||| ||||||||| | || ||| || | ||| | || || Sbjct 1918340 ATCTGCTAATGAAGGTTACAAATTTGGTCAAAAGGACAAAATCTATGATATTATAGCTGC 1918399 Query 164489 TCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTT 164548 ||| | ||| |||| | ||||||| ||||| || ||||| || || |||| || Sbjct 1918400 TCATGATTATTTTGTCGGATTGATCTTTCAATATGCAAGTTTCAATAATTCTCGTT-TTT 1918458 Query 164549 GCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTT 164590 | || ||||| | || ||| |||| | || || ||||| Sbjct 1918459 TAATTTTTTCCTAGTTGTTTGG-CTGTAATAGGTATTTGGTT 1918499 Score = 102 bits (112), Expect = 9e-17 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 163830 TGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGC 163888 ||||| || ||| ||||||| | ||| | | | ||||| ||||| || || |||| Sbjct 33213522 TGGTTTGGTGTTTTGATGATTCTTACTTTATTGACTGCAACT-TCTGTATTTATTATCGC 33213580 Query 163889 CTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCT 163948 || | | |||||| || | || || ||||||||||||||||||| | || || | Sbjct 33213581 TTTTATTGTTGCTCCTCCATTAGATATTGATGGTATTCGTGAACCTGATTTTGGATCCTT 33213640 Query 163949 CATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCT 164008 | ||||| || || ||||| ||||||||| || |||| | |||| || || ||| | Sbjct 33213641 ACTTTATGGAAATAATATCATTTCTGGTGCAATTATTCCTACTTCCACGGCTATAGGTTT 33213700 Query 164009 TCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || || || ||||||| || || |||||||||| Sbjct 33213701 GCATTTTTATCCTATATGGGAAG-CGACTCTGTTGATGAATG 33213741 >seq2 Length=49040938 Score = 158 bits (174), Expect = 1e-33 Identities = 268/385 (70%), Gaps = 15/385 (4%) Strand=Plus/Plus Query 165824 GATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTACTCAAGAGGAAGAAACCTAC 165883 |||||||| ||||||||| || | ||| || | || |||| ||||||| || Sbjct 27892975 GATGGTGATAGTGCAAATACAATCTGTGTTTTTAACCCAACCCAAGCTTAAGAAACTTAT 27893034 Query 165884 TCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAG 165943 |||||||| ||| || || || ||||| || ||||| || |||| ||| ||| | Sbjct 27893035 TCAATGGTA--TGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATTA- 27893091 Query 165944 AGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATC 166003 |||||||||||| | ||||| || || || ||| | |||| ||| | | Sbjct 27893092 ---------CATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGATGAGTGCTCTT 27893142 Query 166004 GGTATTATTGGTCTTGCTCTCAACCTT-CGTGCTTATGACTTTGTATCCCAAGAGA-TCA 166061 | || | ||| | | || ||||| ||||||||||| || || || ||||| | | Sbjct 27893143 AGGATAGTCGGT-TAGGCCTTGACCTTACGTGCTTATGATTTCGTTTCTCAAGAAATTTT 27893201 Query 166062 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAG 166121 | ||||| ||||| || || ||||| | || ||||| ||||| |||||||| || |||| Sbjct 27893202 GCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCTCTTAAACGAAG 27893261 Query 166122 GTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAG 166181 || |||||| ||| | ||| | ||||| | ||||| ||| || | |||||||| | Sbjct 27893262 GTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTATATTCCCTGAGG 27893321 Query 166182 AAGTTCTGCCTAGGGGTAACGCGCT 166206 | ||||| || | |||||||| || Sbjct 27893322 AGGTTCTACCACGTGGTAACGCTCT 27893346 >seq7 Length=51758522 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 164112 TACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTT 164171 |||||||||||||| || ||||| || ||||| |||||||||||||||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 164172 GCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 164231 || || || || || |||||||| || | || || ||| || |||||||| | |||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 164232 GGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTG 164291 || || || || | ||||| | || || ||||| || ||||| | ||| | || Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 164292 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTT 164326 || || || ||||| || || || ||||| || || Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 132 bits (146), Expect = 5e-26 Identities = 185/260 (71%), Gaps = 11/260 (4%) Strand=Plus/Minus Query 165882 ACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 165941 |||||||||||||||| || || || ||||| || ||||| || |||| ||| | Sbjct 1232873 ACTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTCAT---- 1232818 Query 165942 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCA 166001 ||||| |||||||||||| | ||||| || || | ||| | || | ||| | Sbjct 1232817 -----TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTC 1232763 Query 166002 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCA 166061 | || | | ||| | || | ||| | |||||||||| || || || ||||| ||| Sbjct 1232762 TTGGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCC 1232703 Query 166062 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAG 166121 | ||||| ||| | || || ||||| || ||| ||| ||||| |||||||| || ||| Sbjct 1232702 GCGCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTCTCTTAAA--AAG 1232645 Query 166122 GTCTTCGTGCTTGGTTGGCA 166141 || ||||||| ||| ||||| Sbjct 1232644 GTATTCGTGCGTGGATGGCA 1232625 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 164632 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 164691 |||| || |||||||| ||| | | ||| |||| |||||||| | || || ||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 164692 ACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACT 164751 | || | ||||| ||| || ||||||||||| ||||| || ||||| ||||| || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 164752 TCCCTCTGGATCTCGCTGC 164770 ||||||| ||||| ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 >seq1 Length=52205531 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 165902 CGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTT 165961 || || ||||| || ||||| || |||| ||| ||||| | ||||| ||||||||| Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 165962 ATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCT 166021 ||| | ||||| || || | ||| | |||| ||| | | || | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 166022 CTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAG 166081 || ||| | ||||||||||| || || || ||||| ||| | ||||| ||||| || || Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 166082 TTTGAAACCTTCTACACGAAAAACATTCTCTT 166113 ||||| || |||||||| ||||| |||||||| Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCTCTT 38350292 >seq4 Length=45960019 Score = 114 bits (126), Expect = 1e-20 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 166022 CTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAG 166081 || ||| | ||||||||||| || || || ||||| ||| | ||| | |||| | || Sbjct 43482223 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGCATGA-AAGATTCTGAA 43482281 Query 166082 TTTGAAACCTTCTACAC-GAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGC 166140 ||||| || || ||||| ||||| |||||||| || |||||| ||||||| ||| |||| Sbjct 43482282 TTTGATACTTTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGC 43482341 Query 166141 ACCAGTC--GATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGT 166198 | | || ||||| || ||||| ||| || | |||||||| || ||||| || | || Sbjct 43482342 A--ATTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGA 43482399 Query 166199 AACGCGCT 166206 ||||| || Sbjct 43482400 AACGCTCT 43482407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556919871215520