Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq9 129 7e-25 seq7 127 2e-24 seq8 93.3 5e-14 >seq9 Length=37469608 Score = 129 bits (142), Expect = 7e-25 Identities = 457/710 (64%), Gaps = 22/710 (3%) Strand=Plus/Plus Query 168538 GTTCGGTGTCTTAATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCAT 168596 ||| ||||| || ||||| || | | ||||| || | ||| || ||| | || | Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 168597 TTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAA 168656 |||| | ||| || || || |||| || || || || ||||| || | ||| Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 168657 TGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTAC 168716 | ||||||||||| ||||| || ||||| | ||| ||| || || | | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 168717 ACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTT 168776 | || || || || ||||||| || | ||||| || |||| || | ||||||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 168777 ACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGG 168836 | | | | | | || ||| || | | | || |||||||||| | | |||| Sbjct 1918000 ATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCTTGCTACATGGGTCGTGAATGGG 1918059 Query 168837 AA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTA 168895 || ||| | | | | | |||||| | |||||| |||||| |||||| | || | Sbjct 1918060 AACTTAACTTTC-GTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTGAT 1918118 Query 168896 TCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGT 168955 | || | ||| || ||| | | || || ||||||| || || || ||||| Sbjct 1918119 GCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGA 1918178 Query 168956 ATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAAC 169015 |||||| ||||||||| ||| || ||||| || ||| | ||||| || ||||| || Sbjct 1918179 ATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAAT 1918238 Query 169016 ATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTC 169075 ||||||||||||| || || || | | || | ||| | || || || |||||| Sbjct 1918239 ATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTATTC 1918298 Query 169076 TCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAA 169135 || || ||| ||| | ||||| | |||| || | | ||| Sbjct 1918299 AGTGCTATAAATGATTCCTTAGTAAC----TTTCTA------------CCTTA--ATGAA 1918340 Query 169136 TCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCA 169195 ||| || | |||||||| || |||||| | || ||| |||| ||||| | || || Sbjct 1918341 TCTGCTAATGAAGGTTACAAATTTGGTCAAAAGGACAAAATCTATGATATTATAGCTGCT 1918400 Query 169196 CATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 |||| || || | |||| ||||| || |||||||||||||| || || Sbjct 1918401 CATGATTATTTTGTCGGATTGATCTTTCAATATGCAAGTTTCAATAATTC 1918450 >seq7 Length=51758522 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 168817 CTACATGGGTAGACAGTGGGAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTG 168875 |||||||||| | | || ||| ||| | | | || |||||| | |||||||| || Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTC-GTCTGGGTATGCGTCCTTGGATTGCTG 47750186 Query 168876 TTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTC 168935 |||| |||||||| || || | || || ||| || ||| | | || || |||||| Sbjct 47750187 TTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTC 47750246 Query 168936 AGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCG 168995 | || || || |||||||||||| ||||||||||||| || ||||| || ||| | | Sbjct 47750247 AAGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTG 47750306 Query 168996 TATTCCAAGCAGAGCACAACATTCTTATGCATCCCTT 169032 |||| || || ||||| || |||||||||||||| || Sbjct 47750307 TATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 169340 TTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGAC 169399 ||||| || |||||||| || || ||| | | ||| | || ||| |||| ||| Sbjct 31293222 TTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGAT 31293281 Query 169400 GTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTC 169459 | ||||| |||| ||||||||||||||||| |||||||| ||||| ||||| || ||| Sbjct 31293282 ATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATTTC 31293341 Query 169460 CCACTAGACTTAGC 169473 || ||||| |||| Sbjct 31293342 CCTCTAGATCTAGC 31293355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564436604691840