Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq9 149 7e-31 seq7 138 1e-27 seq8 82.4 9e-11 >seq9 Length=37469608 Score = 149 bits (164), Expect = 7e-31 Identities = 304/452 (67%), Gaps = 0/452 (0%) Strand=Plus/Plus Query 169783 TTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTA 169842 ||||| | ||||| |||| || || || ||||| | ||||| || || ||||| Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 169843 GCAGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAAC 169902 || || | | ||||| ||||| ||||| |||||||| | ||| ||| Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCG 1917926 Query 169903 GCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTAT 169962 || || | | | || || |||||||| ||||||| | | | ||||| || | || Sbjct 1917927 GCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATAC 1917986 Query 169963 AACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATG 170022 |||| ||||||||| || || || | | || ||| | | | | || ||||||| Sbjct 1917987 AACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCTTGCTACATG 1918046 Query 170023 GGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATAT 170082 ||| | | |||||||| | ||||| ||||||| || |||||| ||| |||||| Sbjct 1918047 GGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATAT 1918106 Query 170083 TCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCT 170142 || |||| | |||| | | | ||| ||||| | |||||| | ||||| ||| Sbjct 1918107 TCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGC 1918166 Query 170143 TTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAA 170202 || || || ||||||||| |||| || | ||||| || || || ||| | ||||| || Sbjct 1918167 TTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAG 1918226 Query 170203 GCAGAGCACAACATTCTTATGCACCCATTCCA 170234 ||||| || ||||||||||| | ||| || Sbjct 1918227 ATTGAGCATAATATTCTTATGCATCAATTTCA 1918258 >seq7 Length=51758522 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 170016 CTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGT 170075 |||||||||| | | || ||||| | ||| | ||||||||||||||||| ||| Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 47750187 Query 170076 AGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCA 170135 |||||||| ||||| || |||| || ||||| ||||| | |||||| | ||||| Sbjct 47750188 TGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCA 47750247 Query 170136 GGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGT 170195 ||| || || || || |||||| |||| || || ||||| || || || ||| | || Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 170196 ATTCCAAGCAGAGCACAACATTCTTATGCACCCATT 170231 ||| || || ||||| || ||||||||||| ||||| Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 ||||| |||||||| || | || ||| | ||| ||| | ||| ||||| || Sbjct 31293222 TTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGAT 31293281 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| |||| ||||| ||||||||||| |||||||| |||||||| || || ||| Sbjct 31293282 ATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATTTC 31293341 Query 170659 CCACTTGA 170666 || || || Sbjct 31293342 CCTCTAGA 31293349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582842841795200