Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq9 226 3e-54 seq7 163 3e-35 seq8 84.2 2e-11 >seq9 Length=37469608 Score = 226 bits (250), Expect = 3e-54 Identities = 473/697 (68%), Gaps = 26/697 (4%) Strand=Plus/Minus Query 84149 AAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTT 84208 ||||||||| || | || | |||| || | | |||||| | | | ||||| ||| || Sbjct 1918500 AAACCAAATACCTATTACAG-CCAAACAACTAGGAAAAAATTAAAA-AACGAGAATTATT 1918443 Query 84209 GAAGGAAGCATACTGGAAGAT-AAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTAT 84267 ||| ||||| || ||||| || |||| || || | |||||||| | ||||| || Sbjct 1918442 GAAACTTGCATATTGAAAGATCAATCCGACAAAA-TAATCATGAGCAGCTATAATATCAT 1918384 Query 84268 AAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTT 84327 | ||| || | |||||| || |||||||| | |||| | || || Sbjct 1918383 AGATTTTGTCCTTTTGACCAAATTTGTAACCTT------------CATTAGC---AGATT 1918339 Query 84328 CTCGGATTAGAGAAGAA-GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCG 84386 | |||| | |||| || || | ||| ||| || ||| |||||| | || Sbjct 1918338 C----ATTAAGGTAGAAAGTTACTAAGGAATCATTTATAGCACTGAATAGGGAGTTGCCA 1918283 Query 84387 AATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGG 84446 |||||||||| || | |||| |||||| |||||||||| || ||||| || ||| Sbjct 1918282 AATACACCAGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGA 1918223 Query 84447 AAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAA 84506 || |||| ||| | ||||| || || | || || | ||||| ||||| || || Sbjct 1918222 AATACAATCATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTT 1918163 Query 84507 CCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAA 84566 ||||| || | |||||| | | ||| ||| || | |||||| | |||| || || Sbjct 1918162 CCTTGACCAATAGGATAGATCAAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATAT 1918103 Query 84567 GCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATG 84626 |||||| ||||| || ||||||| | |||| | |||||||||||||||||||||| Sbjct 1918102 GCAACAGCAATCCAATGATGCATACCCAAACGAAAGTTAAGTTCCCATTCACGACCCATG 1918043 Query 84627 TAAGCAA-ATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATA 84685 | ||||| | ||| || | ||| || | |||| |||| |||||| || | || || Sbjct 1918042 T-AGCAAGCTACACTAAGTAAGAAATGTAGAACAATTAGTTCATAAGGACCGTCGTTGTA 1917984 Query 84686 TAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATT 84745 ||| ||||| || | | | ||||||| |||||||| ||||| | | | ||||| Sbjct 1917983 TAGGCATTCATCAACAAAAGTCACTTCCCATATAGGATAAAAATGCAAATCTATAGCCGC 1917924 Query 84746 AGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGAC 84805 | | | ||| |||||||||||||| |||||||| || | || || ||| || Sbjct 1917923 AAAAGTATGAATAGTCGCACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAAC 1917864 Query 84806 TGGCTCACGGATACCGTCAATATCAACTGGGGGTGCA 84842 ||||| | ||||| ||| |||| ||||| || ||| Sbjct 1917863 AGGCTCGTGAATACCATCATTATCCACTGGAGGGGCA 1917827 Score = 105 bits (116), Expect = 8e-18 Identities = 175/249 (70%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 84663 AGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGA 84722 |||| |||||| | ||||||| ||||| || | | | |||||||| |||||| Sbjct 33213768 AGTTCATAAGGATCGTTGTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGA 33213710 Query 84723 TAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTT 84782 || ||||| | ||| ||||| | || | |||| | |||||||||||||| || ||| Sbjct 33213709 TAAAAATGCAAACCTATAGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTT 33213650 Query 84783 CCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCA 84842 || || | | || ||| | || ||||| ||||| |||||||| | ||| || ||| Sbjct 33213649 CCATAAAGTAAGGATCCAAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCA 33213590 Query 84843 CCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGT 84901 ||| || || || || || ||||| ||| |||| | || ||| ||||||| | | Sbjct 33213589 ACAATAAAAGCGATAATAAATACAGA-AGTTGCAGTCAATAAAGTAAGAATCATCAAAAC 33213531 Query 84902 TCCAAACCA 84910 |||||||| Sbjct 33213530 ACCAAACCA 33213522 >seq7 Length=51758522 Score = 163 bits (180), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 84412 GAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTC 84471 |||| ||||||||||| || ||||| || ||||| || |||| ||| | ||||| || | Sbjct 47750345 GAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTAC 47750286 Query 84472 CTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGA 84531 | || || || | ||||| ||||| || || ||||| || | |||||| | | || Sbjct 47750285 CAGAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGA 47750226 Query 84532 ATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATAC 84591 | ||||||| || |||||||| ||||| || || |||||| ||||| |||||||||| Sbjct 47750225 AAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATAC 47750166 Query 84592 CGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAA-ATGCACCAA 84642 | |||||| | |||||| |||||||||||||||| ||||| | |||||| Sbjct 47750165 CCAGACGAAAACTAAGTTCTCATTCACGACCCATGT-AGCAAGCTACACCAA 47750115 >seq8 Length=59662532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||| ||||| || |||||||| ||||| |||||||||||||| Sbjct 31293355 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGGTTA 31293296 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || || |||| | ||| ||||||||||| | ||||| ||| ||||| || | Sbjct 31293295 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGAT 31293236 Query 84093 TGATTGAAGTTAAA 84106 || ||||| ||||| Sbjct 31293235 TGGTTGAAATTAAA 31293222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571268544228640