Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq9 113 1e-20 seq7 113 1e-20 seq8 93.3 1e-14 >seq9 Length=37469608 Score = 113 bits (124), Expect = 1e-20 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Plus Query 25895 TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTT 25954 ||||| | || || |||| || || || || |||| ||||| || | ||||| ||| Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 25955 TCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAAC 26014 | || || || | || ||||||||||| || || || || | | | | || | | Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGC-GACTATTCATACTTTTGC 1917925 Query 26015 G-CAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCACAC-TGGACGAGTGGCTAT 26072 | | || | | |||||||| || || ||||||| || | | || || || |||| Sbjct 1917926 GGCTATAGATTTGCATTTTTATCCTATATGGGAAG-TGACTTTTGTTGATGAATGCCTAT 1917984 Query 26073 ACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATA 26130 |||| | ||| || ||| |||| ||| | | || |||||| | | ||||| || | | Sbjct 1917985 ACAACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCTTGCTACA 1918044 Query 26131 TGCAGGGAGACAGTGGGAACT-ATCTTACAGACTAGGAATGAGACCATGGATATTTGTTG 26189 || || | | |||||||| | ||| | | | || ||| | ||||| ||||| Sbjct 1918045 TG--GGTCGTGAATGGGAACTTAACTTTC-GTTTGGGTATGCATCATTGGATTGCTGTTG 1918101 Query 26190 CATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAG 26249 ||||| || | || | || | | | | || ||||| | |||||| | || |||| Sbjct 1918102 CATATTCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAG 1918161 Query 26250 GGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTAT 26309 | || ||| |||||||||||| | || || | ||||||||| || |||||| | |||| Sbjct 1918162 GAAGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTAT 1918221 Query 26310 TCCAAGCAGAACATAATATACTCATGCACCCATTCCA 26346 | || || |||||||| || ||||| | ||| || Sbjct 1918222 TTCAGATTGAGCATAATATTCTTATGCATCAATTTCA 1918258 >seq7 Length=51758522 Score = 113 bits (124), Expect = 1e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 26162 CTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCA 26221 || || ||| | || ||||| |||||||||| |||| || | | || ||| || Sbjct 47750162 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCT 47750221 Query 26222 GTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATC 26281 || ||||| | |||||| | || ||||| || ||| ||||| |||||| | || || Sbjct 47750222 GTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTTTAGGAATT 47750281 Query 26282 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCA 26341 ||||||||||| || |||||| | ||||| || || || |||||||| || ||||| ||| Sbjct 47750282 TCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCA 47750341 Query 26342 TT 26343 || Sbjct 47750342 TT 47750343 >seq8 Length=59662532 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 26649 GTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTG 26708 ||||||| || ||||| || ||||| ||| | | || ||||| ||| ||||||| Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 26709 ATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACT 26768 || | | |||||||||||||| || | ||||| ||||| || |||||||||||||| | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 26769 TTCCACTTGACTTAGC 26784 | || || || |||| Sbjct 31293340 TCCCTCTAGATCTAGC 31293355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146725166397792