Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq9 197 4e-46 seq7 190 6e-44 >seq9 Length=37469608 Score = 197 bits (218), Expect = 4e-46 Identities = 466/700 (67%), Gaps = 29/700 (4%) Strand=Plus/Minus Query 36169 GCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAGA 36228 ||||| || | ||||| |||| |||| || |||||| || || ||||| || |||| Sbjct 1918481 GCCAAACAACTAGGAAAAAAT-TAAAAAACGAGAATTATTGAAACTTGCATATTGAAAGA 1918423 Query 36229 TGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGA 36288 | | || |||| || ||||||| || | ||| | ||| | | || | ||| || | Sbjct 1918422 TCAATCCGACAAAATAATCATGAGCAGCTATAATATCATAGATTTTGTCCTTTTGACCAA 1918363 Query 36289 ATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAAGTAA 36348 |||| || || | || ||||||| |||| || |||| | Sbjct 1918362 ATTTGTAACCTTCATTAGCAGATTCAT------------------TAAGGTAGAAAGTTA 1918321 Query 36349 C-AAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGC 36407 | ||| || | |||||| ||||| | || ||||| || | |||| | | Sbjct 1918320 CTAAGGAATCATTT-ATAGCACTGAATAGGGAGTTGCCAAATACACCAGTCACACTTAAC 1918262 Query 36408 ATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAA 36467 | || || |||||||||| ||||| || || |||||| |||| ||||||||||||| Sbjct 1918261 ACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAATCATAAAATTGAAA 1918202 Query 36468 GTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACT 36527 || || |||| || | |||||| ||||| || || || ||||| |||| ||| |||| Sbjct 1918201 GTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACCAATAGGATAGATC 1918142 Query 36528 AAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTC 36587 ||||| ||| ||| | |||||| |||| | |||||| || ||| ||||| | | Sbjct 1918141 AAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGCAATCCAATGATGC 1918082 Query 36588 ATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA---AGTAAGCTGAGATACCAA-T 36643 ||||| | | | | |||||||||||| || |||| || ||||| | || || | Sbjct 1918081 ATACCCAAACGAAAGTTAAGTTCCCATTCACGACCCATGTAGCAAGCT---ACACTAAGT 1918025 Query 36644 GAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGT 36703 ||||| || | ||||| |||| ||| || || |||| |||| || || || | Sbjct 1918024 AAGAAA-TGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGCATTCATCAACAAA 1917966 Query 36704 TGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGC 36763 | ||||||| || || || || || | | | || || | | | | | || Sbjct 1917965 AGTCACTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAAGTATGAATAGTCGC 1917906 Query 36764 CCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATC 36823 ||||| ||||| ||||||||||| |||| | ||| | |||||||| |||||||||| Sbjct 1917905 ACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGCTCGTGAATACCATC 1917846 Query 36824 TATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 36863 ||||||| ||||| ||| | | ||| || || | |||| Sbjct 1917845 ATTATCCACTGGAGGGGCAACGATAAAAGCGATAATAAAT 1917806 Score = 107 bits (118), Expect = 6e-19 Identities = 190/276 (69%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 36680 GTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGAT 36739 ||||||||| || || || | | | |||||||| || || || || || | ||| || Sbjct 33213751 GTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTAT 33213693 Query 36740 TGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCC 36799 || | || | || | ||||| ||||| ||||| || |||||||| ||||| | ||| Sbjct 33213692 AGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCC 33213633 Query 36800 TGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAA 36859 | |||| |||||||||||||| ||||| | ||||| ||| ||| ||| || || | Sbjct 33213632 AAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAAT 33213573 Query 36860 AAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATA 36919 |||| | | ||| || || | | | | ||||| | || |||||||| | | || Sbjct 33213572 AAATACAGAAGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCAAACCATCTTATGTA 33213513 Query 36920 GAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 || || || ||| | || || | | ||| ||| || Sbjct 33213512 AAGACGATTTTTTATGCTGGTTATCTAGTTACAAAA 33213477 >seq7 Length=51758522 Score = 190 bits (210), Expect = 6e-44 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 36414 AACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCT 36473 || ||||||||||| ||||| || || |||||||| |||| ||||||||||||||| || Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 36474 GAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAAT 36533 ||||| || | |||||||||||| || || || ||||| |||| ||| |||| ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 36534 ACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCT 36593 |||||| || ||||||||||| |||||||| || ||| ||||| || | |||||| Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 36594 AGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 36628 || | | |||||||||| |||| || |||| ||| Sbjct 47750163 AGACGAAAACTAAGTTCTCATTCACGACCCATGTA 47750129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150453135054632