Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq9 185 3e-42 seq7 185 3e-42 >seq9 Length=37469608 Score = 185 bits (204), Expect = 3e-42 Identities = 463/699 (66%), Gaps = 27/699 (4%) Strand=Plus/Minus Query 25649 GCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAGA 25708 ||||| || | ||||| |||| |||| ||| |||||| || || ||||| || |||| Sbjct 1918481 GCCAAACAACTAGGAAAAAAT-TAAAAAACGAGAATTATTGAAACTTGCATATTGAAAGA 1918423 Query 25709 TGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGA 25768 | | || |||| || ||||||| || | ||| | ||| | | || | ||| || | Sbjct 1918422 TCAATCCGACAAAATAATCATGAGCAGCTATAATATCATAGATTTTGTCCTTTTGACCAA 1918363 Query 25769 ATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAAGTAA 25828 |||| || || | || ||||||| |||| || |||| | Sbjct 1918362 ATTTGTAACCTTCATTAGCAGATTCAT------------------TAAGGTAGAAAGTTA 1918321 Query 25829 C-AAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGC 25887 | ||| || | |||||| ||||| | || ||||| || | |||| | | Sbjct 1918320 CTAAGGAATCATTT-ATAGCACTGAATAGGGAGTTGCCAAATACACCAGTCACACTTAAC 1918262 Query 25888 ATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAA 25947 | || || |||||||||| ||||| || || |||||| |||| ||||||||||||| Sbjct 1918261 ACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAATCATAAAATTGAAA 1918202 Query 25948 GTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACT 26007 || || |||| || | |||||| ||||| || || || ||||| |||| ||| |||| Sbjct 1918201 GTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACCAATAGGATAGATC 1918142 Query 26008 AAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTC 26067 ||||| ||| ||| | |||||| |||| | |||||| || ||| ||||| | | Sbjct 1918141 AAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGCAATCCAATGATGC 1918082 Query 26068 ATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA---AGTAAGCTGAGATGCCGATG 26124 || || | | | | |||||||||||| || |||| || ||||| | | | | Sbjct 1918081 ATACCCAAACGAAAGTTAAGTTCCCATTCACGACCCATGTAGCAAGCT-ACACTAAG-TA 1918024 Query 26125 AGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTT 26184 ||||| || | ||||| |||| ||| || || |||| || | || || || | Sbjct 1918023 AGAAA-TGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGCATTCATCAACAAAA 1917965 Query 26185 GCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCC 26244 | ||||||| || || || || || | | | || || | | | | | | || Sbjct 1917964 GTCACTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAAGTATGAATAGTCGCA 1917905 Query 26245 CCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCT 26304 || || ||||| ||||||||||| |||| | ||| | |||||||| |||||||||| Sbjct 1917904 CCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGCTCGTGAATACCATCA 1917845 Query 26305 ATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 26343 ||||||| ||||| ||| | | ||| || || | |||| Sbjct 1917844 TTATCCACTGGAGGGGCAACGATAAAAGCGATAATAAAT 1917806 Score = 100 bits (110), Expect = 9e-17 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 26188 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 26247 |||||||| || || || || || | ||| || || | || | || | ||||| || Sbjct 33213724 GCTTCCCATATAGGATAAAAATGCAAACCTATAGCCGTGGAAGTAGGAATAATTGCACCA 33213665 Query 26248 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATA 26307 || ||||| || |||||||| ||||| | ||| | |||| |||||||||||||| ||| Sbjct 33213664 GAAATGATATTATTTCCATAAAGTAAGGATCCAAAATCAGGTTCACGAATACCATCAATA 33213605 Query 26308 TCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCA 26367 || | ||||| ||| ||| ||| || || | |||| | | ||| || || | | | Sbjct 33213604 TCTAATGGAGGAGCAACAATAAAAGCGATAATAAATACAGAAGTTGCAGTCAATAAAGTA 33213545 Query 26368 GGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAG 26427 | ||||| | || |||||||| | | || || || || ||| | || || | | || Sbjct 33213544 AGAATCATCAAAACACCAAACCATCTTATGTAAAGACGATTTTTTATGCTGGTTATCTAG 33213485 Query 26428 TCACATAA 26435 | ||| || Sbjct 33213484 TTACAAAA 33213477 >seq7 Length=51758522 Score = 185 bits (204), Expect = 3e-42 Identities = 170/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25894 AACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCT 25953 || ||||||||||| ||||| || || |||||||| |||| ||||||||||||||| || Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 25954 GAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAAT 26013 ||||| || | |||||||||||| || || || ||||| |||| ||| |||| ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 26014 ACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATGCCT 26073 |||||| || ||||||||||| |||||||| || ||| ||||| || | ||| || Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 26074 AGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 26108 || | | |||||||||| |||| || |||| ||| Sbjct 47750163 AGACGAAAACTAAGTTCTCATTCACGACCCATGTA 47750129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151992322113808