Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq7 120 3e-22 seq8 95.1 1e-14 >seq7 Length=51758522 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 162832 GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATAC 162891 |||||| | || |||||| || || | ||||||||||||||||| ||||||||| Sbjct 47750135 GGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 47750194 Query 162892 TCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCT 162951 || || || || | || || ||||| |||||| |||||||| | |||||||| Sbjct 47750195 TCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGC 47750254 Query 162952 TTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAA 163011 || || || | |||||| | || |||||||||||||| || | ||| | || || || Sbjct 47750255 TTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAG 47750314 Query 163012 GCAGAGCACAACATCCTAATGCACCCCTT 163040 || ||||| || || || ||||| || || Sbjct 47750315 GCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/142 (75%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 163346 GTTTCAACTTCAACCAATCCGTCGTTGACGC---AGGTGGTAAAGTGATTCCTACTTGGG 163402 |||| || |||||||||||||| ||||| |||| || || || ||| |||| Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGT---GTAATAAATACCTGGG 31293276 Query 163403 CAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACA 163462 | ||||| ||||| |||| |||||||||||||| ||||| || ||||||||||| | Sbjct 31293277 CTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATA 31293336 Query 163463 ACTTCCCACTTGACCTTGCTGC 163484 | ||||| || || || ||||| Sbjct 31293337 ATTTCCCTCTAGATCTAGCTGC 31293358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553079905199520