Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 199 7e-46 >seq1 Length=52205531 Score = 199 bits (220), Expect = 7e-46 Identities = 572/864 (66%), Gaps = 42/864 (5%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| |||||||| | ||||| |||||||| |||||||||| || ||| || ||| Sbjct 19482299 CTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATAAGCTC 19482358 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTCAGGCCCATCTGTTCC- 47953 ||| | ||| ||||| | || |||| |||| || |||| | || Sbjct 19482359 CATCCAATCGAACGGGTTCTGCACATTGTACAGCTTCCCG---CA--CCCAAGCGCACCG 19482413 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 |||| ||| || || |||| ||||| ||| | || |||||| || | Sbjct 19482414 AGCAACCTATCAGCAACAAACTCAATGTACACACTCATCAAGGCCCCGTTCATCCCCACC 19482473 Query 48014 AGGGACACGGGCAA---AGC-CTTTGT-GAGAAACTCCTTCTCTATCTGCACGGCTTCCC 48068 | ||| |||| ||| | | | || ||||||| |||| || | || || || | Sbjct 19482474 A-----ACGCGCAAGGAAGCGCGTCGCAGACAAACTCCCTCTCGATGTCAACTGCATCGC 19482528 Query 48069 CCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCA 48128 ||| |||| | | ||||| ||| | | | ||||| |||| | | | ||||||| Sbjct 19482529 GCACGATCTCCCTCACGCGCTCCTCGGGGAGCTTGTTCCGCATGA---TAGAGTAGAGCA 19482585 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 ||| || ||||| | ||| | || ||||| ||| |||||| ||||||||||| | Sbjct 19482586 GGCACGCGAAGTCGCAGTGGAGCCCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAA 19482645 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAG-AGCCAGAGAAG 48247 | || ||||||| || | || ||||||||||| || | || |||| || |||||| Sbjct 19482646 GTCCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATAG-AGCAAAAGCTTCCGGAGAAG 19482704 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 ||||| ||||| || ||||| || || | ||| |||| || || ||| Sbjct 19482705 AAGATTCCCTCGACGCAGGCGAAGGCAACGATGCGCTCGGCGAAGGACTCGGCGGAGTC- 19482763 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 ||||||| || ||||||| |||||||| ||| ||| || || || || ||||| Sbjct 19482764 --GATCCAGCGTAGGGCCCAGTTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCG 19482821 Query 48368 CGGAAGA---GCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTT 48421 |||||| | |||| ||| | ||| | ||||| | ||| || | Sbjct 19482822 TGGAAGAGACGGGTCTT---CTCTTTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCT- 19482877 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 ||||||||| ||||| | ||||| || |||||||| || ||||||||||| | |||| Sbjct 19482878 --GTACATCTCGGAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCC 19482935 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATC 48540 || | ||||| || || | ||| | || || || || ||| ||| || ||||| Sbjct 19482936 TCGGAGACCTGGACCTCCTTCATGAAAC-GGCCGGCAAGGTTTTCAAGGACGATGCCATC 19482994 Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC 48600 || || || |||||||| ||||| || | | ||||||||||||| | ||| |||| Sbjct 19482995 GGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAGAGT 19483054 Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660 | ||| | | | ||| | ||||| || || ||| | |||||||| || || Sbjct 19483055 CTCCCAATGCCGGATGTCCTGCGAGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTC 19483114 Query 48661 TGCTTTTTTGTACATGCCCCATAT 48684 ||||| |||||||| |||| || Sbjct 19483115 AGCTTTCTTGTACATTTCCCAGAT 19483138 Score = 187 bits (206), Expect = 5e-42 Identities = 434/649 (67%), Gaps = 14/649 (2%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||| ||| ||||||| | || || || | |||||||| ||| ||||| ||| | | | Sbjct 45627088 AAATTCCCTCTCTATGTCAACCGCGTCGCGCACAATCTCCTTCACGCGCTCCTCAGTGAG 45627029 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || | ||| | | |||| ||| || ||||| | ||| | ||||| || Sbjct 45627028 CTTCTTTCTGAGGAGAGAGTACAAGAG---GCACGCGAAGTCGCAGTGAAGCCCTTCATC 45626972 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || ||||| ||||||||||| |||||| ||||| | || | || |||||||| Sbjct 45626971 TCGCGATATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAACCGCGCTTCTTGAGCCA 45626912 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 ||| || | ||| ||||||||||||||| ||||| || ||||| ||| || Sbjct 45626911 GAATATCGAGCAGAAGCTGCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAGGCGACGAT 45626852 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGTCTGCCTTCT 48338 | ||| ||||||| || | ||| ||||||| | ||| ||||| | |||||||| Sbjct 45626851 GCGCTCGGCGAAAGAGTCGGTGGCGTC---GATCCAGCGCAAG-GCCCACTGTGCCTTCT 45626796 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398 | || ||| || || || |||| ||| ||||| || | || || | ||| Sbjct 45626795 TGGCGACGCAGGGGATGGTGTCTACGGCACGGAACAGGTGGTTCTTTTCGGTGGAGTCTT 45626736 Query 48399 CAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | ||||| ||| || | ||||||||| ||||| | ||||| || |||| Sbjct 45626735 TGATGTAGGTTTCCAAGAGGAGGCT---GTACATCTCGGAGTGGATGTTCTCGATGGCGA 45626679 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| |||||||| || | |||||| | || || | ||| | ||| | | Sbjct 45626678 TCTGGAAGCCGTAGAAAGCACGGGCCTCGGAGACTTGGATTTCCTTCATGAAGCGGGCGG 45626619 Query 48516 GCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGA 48575 || || || || || || || || || ||||||||||| ||||| || | | || Sbjct 45626618 CGAGGTTTTCGAGAACGATACCGTCGGAGGCGGCAAAGAAGGCGAGGACGTGGGTGATGA 45626559 Query 48576 AATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTT 48635 | ||||||||| || |||||| | | |||| | | ||||| | ||||| || | Sbjct 45626558 AGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGGTCTTGGGAAAGGTCAACCT 45626499 Query 48636 CTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 |||| | |||||||| || || ||||| |||||||| ||||||| Sbjct 45626498 CTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATTTCCCATAT 45626450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524555934720