Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 150 3e-31 >seq1 Length=52205531 Score = 150 bits (166), Expect = 3e-31 Identities = 378/563 (67%), Gaps = 15/563 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||||| ||||||||||| || || ||| |||||||||||||||| |||| || Sbjct 45626450 ATATGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTT 45626509 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || | ||| | | |||| || | || || | | ||||| || || ||| || Sbjct 45626510 TCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCAC 45626569 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || |||||||| ||||| || ||||| || ||| || || || | ||| Sbjct 45626570 GTCCTCGCCTTCTTTGCCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTC 45626629 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715 | | |||| | || | |||||| ||| ||||||||| |||||||| |||||||| Sbjct 45626630 ATGAAGGAAATCCAAGTCTCCGAGGCC-CGTGCTTTCTACGGCTTCCAGATCGCCATCGA 45626688 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC 25772 || | ||||| ||| |||| || || || || || ||||| | |||| | | Sbjct 45626689 GAACATCCACTCCGAGATGTA---CAGCCTCCTCTTGGAAACCTACATCAAAGACTCCAC 45626745 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 ||| | | | ||||| ||||| | || ||| ||| || || | |||||| | Sbjct 45626746 CGAAAAGAACCACCTGTTCCGTGCCGTAGACACCATCCCCTGCGTCGCCAAGAAGGCACA 45626805 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 ||||||| || |||||| || ||| | || | || | |||||| | || ||||| Sbjct 45626806 GTGGGCCTTGCGCTGGATCGAC-GCC--ACCGACTCTTTCGCCGAGCGCATCGTCGCCTT 45626862 Query 25893 TG-CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 | |||| || ||||| ||||| ||| || | | ||| | || |||||||||||| Sbjct 45626863 CGCCTGC-GTCGAGGGAATCTTCTTCTCTGGCAGCTTCTGC-TCGATATTCTGGCTCAAG 45626920 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||||| || ||| |||||||| ||||| | || || || Sbjct 45626921 AAGCGCGGTTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGG 45626980 Query 26011 CTCCACAGAGATTTTGCCTGCCT 26033 || ||| | || || || ||||| Sbjct 45626981 CTTCACTGCGACTTCGCGTGCCT 45627003 Score = 149 bits (164), Expect = 1e-30 Identities = 384/571 (67%), Gaps = 17/571 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| ||| || ||| |||||| || || ||| | || || Sbjct 19483138 ATCTGGGAAATGTACAAGAAAGCTGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTC 19483079 Query 25537 GCCAAGGACATGGACGGC--TGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | ||||||| |||| ||| | ||||| || | | ||||| ||||| ||| Sbjct 19483078 TCGCAGGACATC--CGGCATTGGGAGACTCTAACCGATGGCGAGCGCCATTTCATCACCC 19483021 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| | || ||||| || ||||| ||||| || || || || || || | | Sbjct 19483020 ACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTTGAAAACCTTGCCGGCCGTT 19482961 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 ||| | ||| || ||| | |||||| |||||||| || ||||| ||||||| Sbjct 19482960 TCATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTCTACGGCTTTCAGATCGCCATCG 19482901 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCG 25774 | || | ||||| ||| |||| | || || || ||||| | |||| | | Sbjct 19482900 AGAACATTCACTCCGAGATGTACAGCCTCCTCCTTGAAACCTACATAAAAGACTCCAAAG 19482841 Query 25775 AGAGAGATCGG-CTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCGCG 25832 ||| ||| | | || || ||||| || ||| || ||| || ||| | |||||| Sbjct 19482840 AGA-AGACCCGTCTCTTCCACGCCATTGA-CACTATTCCCTGCGTCACCAAGAAGGCTAA 19482783 Query 25833 GTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 |||||| | |||||| || | | ||| || || |||||| | || |||| Sbjct 19482782 CTGGGCCCTACGCTGGATCGACTCCGCCGAGTCCTTCGC----CGAGCGCATCGTTGCCT 19482727 Query 25892 TTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTT-CGTTTGCGGCCATCTTCTGGCTCAA 25949 | || ||| || ||||| ||||| ||| ||| | ||||| | |||||||||||||| Sbjct 19482726 TCGCCTGC-GTCGAGGGAATCTTCTTCTCCGGAAGCTTTTGCT-CTATCTTCTGGCTCAA 19482669 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||||| || || ||| |||||||| |||||| | | |||||||| Sbjct 19482668 GAAGCGAGGCCTCATGCCGGGACTTACCTTCTCCAACGAACTCATCTCCCGCGACGAGGG 19482609 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||||| | || || || |||||||||||| Sbjct 19482608 GCTCCACTGCGACTTCGCGTGCCTGCTCTAC 19482578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836579723520