Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq9 170 6e-38 seq7 161 3e-35 seq8 91.5 4e-14 >seq9 Length=37469608 Score = 170 bits (188), Expect = 6e-38 Identities = 357/527 (68%), Gaps = 4/527 (1%) Strand=Plus/Minus Query 18246 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCT 18305 || ||||| || | |||| | || || || |||||||||| ||||| || || Sbjct 1918285 CCAAATACACCAGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCAATC 1918226 Query 18306 TGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAA 18365 || ||||| | ||| |||||||||||||| ||| || | |||||| ||||| || || Sbjct 1918225 TGAAATACAATCATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAG 1918166 Query 18366 CTCCCTTGTCCAAAAGGATA-AACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGA 18424 || ||||| |||| |||||| | | ||||| || | ||||||| | || | || Sbjct 1918165 CTTCCTTGACCAATAGGATAGATCAAGAAA-ACAACAATAACAGCTGCATCAGGAGTTGA 1918107 Query 18425 ATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCC 18484 ||| |||||| |||||| | ||||||| | | | | |||||||||||| || || Sbjct 1918106 ATATGCAACAGCAATCCAATGATGCATACCCAAACGAAAGTTAAGTTCCCATTCACGACC 1918047 Query 18485 CATGTAAGCTGCGATGCCGA-TGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGT 18543 |||||| || | | | | ||||| || | ||||| |||| ||| || || ||| Sbjct 1918046 CATGTAGCAAGCTACACTAAGTAAGAAA-TGTAGAACAATTAGTTCATAAGGACCGTCGT 1917988 Query 18544 TATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTG 18603 | |||| || || || | | ||||||| || || || || || | | | || | Sbjct 1917987 TGTATAGGCATTCATCAACAAAAGTCACTTCCCATATAGGATAAAAATGCAAATCTATAG 1917928 Query 18604 CGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTG 18663 | | | | | | | || || || ||||| ||||||||||| |||| || ||| Sbjct 1917927 CCGCAAAAGTATGAATAGTCGCACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAA 1917868 Query 18664 AGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAA 18723 | |||||||| |||||||||| | || || ||||| ||| | | ||| || || | || Sbjct 1917867 AAACAGGCTCGTGAATACCATCATTATCCACTGGAGGGGCAACGATAAAAGCGATAATAA 1917808 Query 18724 ATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAAC 18770 || | || || |||||| | ||| ||||| | || |||||| Sbjct 1917807 ATACAAAAGTTGTGGTTAACACAATAGGAATCATCAAAACACCAAAC 1917761 Score = 120 bits (132), Expect = 9e-23 Identities = 193/276 (70%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 18542 GTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGAT 18601 ||||||||| || || || | | | |||||||| || || || || || | ||| || Sbjct 33213751 GTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTAT 33213693 Query 18602 TGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCC 18661 || | || | || | ||||| || || ||||| || |||||||| ||||||| ||| Sbjct 33213692 AGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCC 33213633 Query 18662 TGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAA 18721 | |||| |||||||||||||| || || | ||||||||| ||| ||| || || | Sbjct 33213632 AAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAAT 33213573 Query 18722 AAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTA 18781 |||| | | || ||| || || | | | | ||||| | || |||||||| | | ||| Sbjct 33213572 AAATACAGAAGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCAAACCATCTTATGTA 33213513 Query 18782 GAGGCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 || || || ||| | || || | | ||| ||| || Sbjct 33213512 AAGACGATTTTTTATGCTGGTTATCTAGTTACAAAA 33213477 >seq7 Length=51758522 Score = 161 bits (178), Expect = 3e-35 Identities = 169/217 (78%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 18276 AACGGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTACCG 18335 || ||||||||||| ||||| || || || || ||||| | ||| |||||||||||||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 18336 CTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGATA-AACGAGAAA 18394 ||| || | |||||||||||| || || || ||||| |||| |||||| | | ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 18395 TACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATAC 18453 || | || | || ||||| || || || ||||| |||||| |||||| || ||||||| Sbjct 47750223 -ACAGCAGTA-GCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATAC 47750166 Query 18454 CTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTA 18490 | || | | |||||||||| |||| || |||||||| Sbjct 47750165 CCAGACGAAAACTAAGTTCTCATTCACGACCCATGTA 47750129 >seq8 Length=59662532 Score = 91.5 bits (100), Expect = 4e-14 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||||| ||||| |||||||||||||| || ||||| ||||| | |||||||| Sbjct 31293356 AGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGGTT 31293297 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||||| ||| | | |||||||| ||| || || | ||| | | || | ||| Sbjct 31293296 AGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGA 31293237 Query 17954 TTGGTTGAAGTTGAA 17968 ||||||||| || || Sbjct 31293236 TTGGTTGAAATTAAA 31293222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151317127790552