Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq6 199 5e-46 seq9 141 1e-28 seq2 141 1e-28 seq7 131 2e-25 seq1 131 2e-25 seq8 120 4e-22 seq4 111 2e-19 >seq6 Length=31977256 Score = 199 bits (220), Expect = 5e-46 Identities = 476/712 (67%), Gaps = 21/712 (3%) Strand=Plus/Minus Query 101731 ACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCGACTGGTGCCAACCATGCACGT 101790 ||||||||| | |||| |||||||||||| | |||| | || || ||||||||| Sbjct 21889003 ACCTCTTCAAGGAATATAAAGTTTTCATGAGACTGATTTTGAGTTGTCATCCATGCACGA 21888944 Query 101791 AGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCGAACTCTGGATCTTCTGCT 101850 | |||||| || || | || || || ||||| || |||| || ||| | Sbjct 21888943 ATACCTTCGTTTAAGAAAATATTTTTAGTGTATAAAGTCTTAAA----------TCTATT 21888894 Query 101851 GCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGA-CCAATAAT 101909 || | ||| ||||| || || || ||||||||||| ||||| | || | || |||| || Sbjct 21888893 GCACAGATTTCTTGAGAAACGAAATCATAAGCACGTAGGTTCA-AGGACGAACCAACTAT 21888835 Query 101910 ACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGCATAAAGAAATGCAACCA 101969 || | ||| | || | || | || || ||||| | |||||| ||||| ||||| Sbjct 21888834 CCCAAGAACACTCATTCATAAACGAGTTACTGGTACAAACAACATAAATAAATGTAACCA 21888775 Query 101970 CCTCTTATTACT-AAATGCAATACCAAAGATTTGAGACCAGAAACGGTTTGCTGTAACCA 102028 ||||||| ||| ||| ||||||||||| ||||| || || || | |||| || Sbjct 21888774 ATGCTTATTAGAGAAAAACAACCCCAAAGATTTGGGACCAAAAGCGATTAACAGTAATCA 21888715 Query 102029 TTGAATAAGTCTCTTCCTC-TTGTGTGGAATCGAATGCTTTGAAAGTGTTTGCTTGATCA 102087 ||||||| || | || | ||| || | | || || || || ||| | |||| Sbjct 21888714 TTGAATAGGTTTTTTTCGGGTTGGGTTGGGTTAAAAGCACAAAATGTATTTTCACCATCA 21888655 Query 102088 CCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATTGCTGACAGCAGTGCTCCT 102147 ||||||||| | | ||| | || || || |||| || || || | || ||||| | Sbjct 21888654 CCATCTTCAAATAAAGTACTTTCTACCGTTGCACCATGAATAGCGCATAGTAGTGCAACA 21888595 Query 102148 CCCAGGATAC-CTG-CAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTATGGAAGC 102205 |||| |||| || |||| |||| |||||| |||||||| | ||||| |||| || | Sbjct 21888594 CCCA--ATACAATGACAACTCCCAGCATATGAAATGGGTTTAATGTCCAAGTATGAAATC 21888537 Query 102206 CCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGAACC 102265 || | || | | || | ||| | ||||| || ||| || |||||||| | Sbjct 21888536 TTTGGAAAAATATGATGATTTGAAAATTAGCTGCTCCATTAAAACTAGGAGCAAAGAATC 21888477 Query 102266 AACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCCCAG 102325 ||| |||| || || ||||| || || || ||| ||||||| | | || || || | Sbjct 21888476 AACCAAACTGACCCAGTGGATAAATAAGGAATACATAAACAAAAATAACAATTGGACCTG 21888417 Query 102326 AGAACGCAAT---AGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAATTGAC 102382 |||| ||||| | ||| || || | | | || || ||| | || ||||| Sbjct 21888416 AGAATGCAATTACATTATTATAAGGTTGTAATTGAAAAAATTGAGCAAGTTCAGATTGAT 21888357 Query 102383 GAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCA 102434 | | |||| ||| || | |||| ||||| |||||| | ||||||| ||| Sbjct 21888356 GTAACATGGAACGTATTAATCCAAAAGCACCATGGAGAACAACAAAAGTCCA 21888305 >seq9 Length=37469608 Score = 141 bits (156), Expect = 1e-28 Identities = 459/710 (65%), Gaps = 22/710 (3%) Strand=Plus/Minus Query 103403 GAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACG 103462 || || ||||| ||| ||||| |||||||| | | || ||| ||||||| |||| Sbjct 1918450 GAATTATTGAAACTTGCATATTGAAAGATCAATCCGACAAAATAATCATGAGCAGCTATA 1918391 Query 103463 ATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCA 103522 || | || | | |||| ||| || || |||||||| | || ||||||| || | Sbjct 1918390 ATATCATAGATTTTGTCCTTTTGACCAAATTTGTAACCTTCATTAGCAGATTCA--TTAA 1918333 Query 103523 GTCGTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAA 103582 | || || | || || | ||| | | ||||||||||| || || Sbjct 1918332 G--GT--------------AGAAAGTTACTAAGGAATCATTTATAGCACTGAATAGGGAG 1918289 Query 103583 CCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCG 103642 || || || |||| || | | || ||| || | ||||| ||||| ||||| || Sbjct 1918288 TTGCCAAATACACCAGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCA 1918229 Query 103643 GCTTGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAG 103702 || || || | ||| | ||||| || || |||| || |||||||| |||| || Sbjct 1918228 ATCTGAAATACAATCATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAA 1918169 Query 103703 AACGAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCA 103762 || |||||||||| || |||| |||||| || | |||| ||| |||||| Sbjct 1918168 AAGCTTCCTTGACCAATAGGATAGATCAAGAAAACAACAATAACAGCTGCATCAGGAGTT 1918109 Query 103763 GAGTATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGT 103822 || ||||| ||| ||||| | |||| |||| ||| || | |||||| ||||| Sbjct 1918108 GAATATGCAACAGCAATCCAATGATGCATACCCAAACGAAAGTTAAGTTCCCATTCACGA 1918049 Query 103823 CCCATATATGCATAG--ATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCAC 103880 ||||| || ||| || | | || | ||| || | || | |||| ||||||| Sbjct 1918048 CCCATGTA-GCA-AGCTACACTAAGTAAGAAATGTAGAACAATTAGTTCATAAGGACCGT 1917991 Query 103881 CGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAA 103940 |||| || || || ||||||| | | | ||||||| || ||||| || || | | | | Sbjct 1917990 CGTTGTATAGGCATTCATCAACAAAAGTCACTTCCCATATAGGATAAAAATGCAAATCTA 1917931 Query 103941 TTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAAC 104000 | || | | ||| | |||||||| ||||| ||||| || || | || || | Sbjct 1917930 TAGCCGCAAAAGTATGAATAGTCGCACCAGAAATGATATTGTTTCCATAAAGTAGGGATC 1917871 Query 104001 CAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGA 104060 || || || || |||| || || |||| || ||||| || | | ||||| | | Sbjct 1917870 CAAAAACAGGCTCGTGAATACCATCATTATCCACTGGAGGGGCAACGATAAAAGCGATAA 1917811 Query 104061 TGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAAC 104110 | || | |||| | |||| | | || ||||||| ||||| ||| Sbjct 1917810 TAAATACAAAAGTTGTGGTTAACACAATAGGAATCATCAAAACACCAAAC 1917761 Score = 100 bits (110), Expect = 4e-16 Identities = 177/254 (70%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 103882 GTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAAT 103941 |||||| | || ||||||| ||| | |||||||| || ||||| || || | ||| || Sbjct 33213751 GTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTAT 33213693 Query 103942 TGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACC 104001 || |||| | |||| || ||||||||| ||||| || || || || | | || || Sbjct 33213692 AGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCC 33213633 Query 104002 AGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGAT 104061 | | ||||||||||| || || ||||| | ||||| || | | ||||| | || Sbjct 33213632 AAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAAT 33213573 Query 104062 GAA-GCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACAT 104120 || |||| ||||| | ||| | ||| | ||||||| ||||| ||||| | | | Sbjct 33213572 AAATACAGA-AGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCAAACCATCTTATGT 33213514 Query 104121 AGAGACGGTTGTTT 104134 | ||||| || ||| Sbjct 33213513 AAAGACGATTTTTT 33213500 >seq2 Length=49040938 Score = 141 bits (156), Expect = 1e-28 Identities = 235/336 (70%), Gaps = 15/336 (4%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || ||||||||| | ||||| Sbjct 27893346 AGAGCGTTACCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAAGCTGATCT 27893287 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||| | ||| |||| | |||||| || || || || || || ||||| || | Sbjct 27893286 TGAGCTGCAATCCACACACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTATAAAATA 27893227 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGA-TCTCTTGGGATACAAAGTCATAAGCACG-AA 101887 || || || |||||||| ||||| | | | ||||| || || || ||||||||||| || Sbjct 27893226 TCAAATTCAGGATCTTCCGCTGCGCAAAATTTCTTGAGAAACGAAATCATAAGCACGTAA 27893167 Query 101888 GGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAA 101947 ||| || | | ||| | || | | | ||| |||| | ||| || || || |||| Sbjct 27893166 GGTCAAGGCCTA-ACCGACTATCCTAAGAGCACTCATCCATAAACCAATTACTGGTACAA 27893108 Query 101948 AGAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACC 102007 | | |||||||||||| | ||| ||| |||| ||||||||||| |||| Sbjct 27893107 ATAACATAAAGAAATG----------TAATTGGAAAAAGCAACCCCAAAGATTTGGGACC 27893058 Query 102008 AGAAACGGTTTGCTGTAACCATTGAATAAGTCTCTT 102043 | || || || || |||||||||||||| |||| Sbjct 27893057 AAAAGCGATTAGC--ATACCATTGAATAAGTTTCTT 27893024 >seq7 Length=51758522 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 103616 AAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAGACCAGCATGTAGTTGAAGGTTCCC 103675 || || ||||| ||||| ||||| || || || || || | ||| | ||||| || || Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 103676 GAAATACCCAAAGGCATAGCATCGGAGAACGAACCTTGACCAAAGGGGTAGACCAAGAAT 103735 ||||| || ||||||||| |||| || || |||||||||| || |||| |||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 103736 ACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACAGATCCAGGGGCGCATGCCC 103795 || || | || || ||||||||||| || ||||| ||| ||||| || ||||| ||| Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 103796 AGACGGTAGGACAATTCCCACTCACGTCCCATATA 103830 ||||| | | ||| || ||||| ||||| || Sbjct 47750163 AGACGAAAACTAAGTTCTCATTCACGACCCATGTA 47750129 >seq1 Length=52205531 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101803 AATAGGATGTTCTTTGTGTAGAACGTCTCGAACTCTGGATCTTCTGCTGCTCTGATCTCT 101862 || || || || || |||||||| ||||| || || |||||||| ||||| | ||| ||| Sbjct 38350292 AAGAGAATATTTTTGGTGTAGAAAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCT 38350233 Query 101863 TGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTT 101922 || || || || ||||||||||| | ||| || || | ||| | | || | | ||| Sbjct 38350232 TGAGAAACGAAATCATAAGCACGTAAGTTCAGGGCCAAACCGACTACCCCAAGAGCACTC 38350173 Query 101923 GTCCACAGACCCATAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTATTACTA 101982 |||| | ||| | || || ||||| | |||||||||||| ||||| | ||||| | Sbjct 38350172 ATCCATAAACCAGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAA 38350113 Query 101983 AATGCAATACCAAAGATTTGAGACCAGAAACG 102014 || |||| ||||||||||| ||||| || || Sbjct 38350112 AAAGCAACCCCAAAGATTTGGGACCAAAAGCG 38350081 >seq8 Length=59662532 Score = 120 bits (132), Expect = 4e-22 Identities = 181/258 (70%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 101775 TGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCGAA 101834 ||||| ||| ||||| | ||||| || || || || || || ||| ||| ||||| || Sbjct 1232625 TGCCATCCACGCACGAATACCTT--TTTAAGAGAATATTTTTGTTGTTGAAAGTCTCAAA 1232682 Query 101835 CTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAG 101894 || |||| ||| ||||| | ||| ||||| || || || |||||||||| | ||| | Sbjct 1232683 TTCAGGATATTCCGCTGCGCGGATTTCTTGAGAAACGAAATCATAAGCACATAAGTTCAC 1232742 Query 101895 AGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGCAT 101954 || | ||| | | || | | ||| | || | ||| | || || ||||| | ||| Sbjct 1232743 GGCCAAACCGACCACCCCAAGAGCACTCATTCATAAACCAGTTACTGGTACAAATAACAT 1232802 Query 101955 AAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAAACG 102014 ||||||||| ||||| | ||| |||| ||||||||||| ||||| || || Sbjct 1232803 AAAGAAATGTAACCA---------ATGAAAAGCAACCCCAAAGATTTGGGACCAAAAGCG 1232853 Query 102015 GTTTGCTGTAACCATTGA 102032 || || ||||||||||| Sbjct 1232854 ATTAGCAGTAACCATTGA 1232871 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 103172 GCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGA 103231 ||||| || || || ||||| || ||||| ||||| || ||||||||||||||||| || Sbjct 31293358 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGG 31293299 Query 103232 CCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATG 103291 ||| ||||| | || || |||||||| || | |||||||| |||| ||||| | | Sbjct 31293298 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACG 31293239 Query 103292 GACTGGTTGAAGTTGAA 103308 || |||||||| || || Sbjct 31293238 GATTGGTTGAAATTAAA 31293222 >seq4 Length=45960019 Score = 111 bits (122), Expect = 2e-19 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATC- 101768 |||||||| || | ||| | ||||| ||||| |||| || ||||||||| || ||||| Sbjct 43482407 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 43482348 Query 101769 -GACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTT-GTGTAGAAC 101826 || | ||||| ||| ||||| | |||||| || || || || || ||| ||||| || Sbjct 43482347 TGAAT--TGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTTTGTGTACAAA 43482290 Query 101827 GTCTCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGA 101886 || || || || | ||||| | ||| | ||| ||||| || || || ||||||||||| Sbjct 43482289 GTATCAAATTCAGAATCTT-TCATGCACGGATTTCTTGAGAAACGAAATCATAAGCACGT 43482231 Query 101887 AGGTTGAG 101894 | ||| || Sbjct 43482230 AAGTTCAG 43482223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633507993404640