Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq9 183 9e-42 seq7 154 4e-33 >seq9 Length=37469608 Score = 183 bits (202), Expect = 9e-42 Identities = 484/728 (66%), Gaps = 27/728 (4%) Strand=Plus/Minus Query 21647 AAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATT 21706 |||||||||||||| |||| ||| || | || || |||| || | ||| |||||||| Sbjct 1918500 AAACCAAATACCTATTACAG-CCAAACAACTAGGAAAAAATTAAAAA-ACGAGAATTATT 1918443 Query 21707 AAAGCTAGCATATTGGAAGAT-AAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGT 21765 || || |||||||| ||||| || ||||| |||||| | |||||||| | ||||| | Sbjct 1918442 GAAACTTGCATATTGAAAGATCAATCCGAC-AAAATAATCATGAGCAGCTATAATATCAT 1918384 Query 21766 AAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCT 21825 | | | |||| ||||||||| |||||||| | || || | | | || || Sbjct 1918383 AGATTTTGTCCTTTTGACCAAATTTGTAACCTTCATTAGCAGATTCAT--TAAG--GTA- 1918329 Query 21826 CACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAA 21885 ||| ||| || | | | || | |||||| ||| | |||| Sbjct 1918328 ---GAA--AGTTACTAAGGAATCA--------TTTATAGCACTGAATAGGGAGTTGCCAA 1918282 Query 21886 ATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGA 21945 |||| || | ||||| | || |||||| |||||||||||||||| |||||| ||| | Sbjct 1918281 ATACACCAGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAA 1918222 Query 21946 ACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGC 22005 | || | ||| | ||||| || || | || || || ||||| |||| ||||| | Sbjct 1918221 ATACAATCATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTC 1918162 Query 22006 CCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACG 22065 | || |||| ||||| | | ||| ||| || | |||| || |||||| || || | Sbjct 1918161 CTTGACCAATAGGATAGATCAAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATG 1918102 Query 22066 CAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGT 22125 ||||| ||||| | ||| || | ||| || |||||||||| || || ||||||| Sbjct 1918101 CAACAGCAATCCAATGATGCATACCCAAACGAAAGTTAAGTTCCCATTCACGACCCATGT 1918042 Query 22126 AAGCAA-AGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTAC 22184 ||||| || | || | ||| || | || | |||| | |||||| ||||||| Sbjct 1918041 -AGCAAGCTACACTAAGTAAGAAATGTAGAACAATTAGTTCATAAGGACCGTCGTTGTAT 1917983 Query 22185 AGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTA 22244 || |||||||||| || ||||||| || || || || || | | || || | Sbjct 1917982 AGGCATTCATCAACAAAAGTCACTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCA 1917923 Query 22245 CTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACG 22304 | ||| || || || ||||| ||||| ||||| | ||||| ||| || Sbjct 1917922 AAAGTATGAATAGTCGCACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACA 1917863 Query 22305 GGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAA---A 22361 || || | || ||||| | || || || || || | | ||| ||||||||||| | Sbjct 1917862 GGCTCGTGAATACCATCATTATCCACTGGAGGGGCAACGATAAAAGCGATAATAAATACA 1917803 Query 22362 CAAGTTGT 22369 ||||||| Sbjct 1917802 AAAGTTGT 1917795 >seq7 Length=51758522 Score = 154 bits (170), Expect = 4e-33 Identities = 168/222 (76%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 21910 GAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAAGGTGC 21969 |||| ||||||||||||||||| ||||||||||| || || | ||| | ||||| || | Sbjct 47750345 GAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTAC 47750286 Query 21970 CGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAAACAAGGA 22029 | || || || || |||||| |||| ||||| || || |||| ||||| | | || Sbjct 47750285 CAGAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGA 47750226 Query 22030 ACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCATCC 22089 | |||||||| || || || |||||||| || || |||||| ||||| || | ||| | Sbjct 47750225 AAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATAC 47750166 Query 22090 CTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAA 22131 | || ||| | |||||||| || || || ||||||| ||||| Sbjct 47750165 CCAGACGAAAACTAAGTTCTCATTCACGACCCATGT-AGCAA 47750125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146206770756240