Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7 120 4e-22 seq1 113 5e-20 seq9 107 2e-18 >seq7 Length=51758522 Score = 120 bits (132), Expect = 4e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 124490 AAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCT 124549 || |||||||| ||||| |||||||| || || || || | |||||| ||||||||||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 124550 GAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAAT 124609 || || || | ||||||||||| || || || ||||||| || || | ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 124610 ACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCC 124668 ||||| || || | || || |||||||| |||||| |||||||||||||| || Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACC 47750165 >seq1 Length=52205531 Score = 113 bits (124), Expect = 5e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || || ||||||||||| |||||||| Sbjct 3416875 TGGGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGC 3416934 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACA--ATTCTGC 139434 | ||| | || | |||| || || || || ||||||| | ||||| | Sbjct 3416935 ATTGCCATCCTCAAAGCAGTCTTTCCAGAAGAATCAAC--ACTGACCCCAATGATTCTTC 3416992 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| | ||||| |||| | || ||| || ||||| || |||||||||||||| | Sbjct 3416993 CTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAGAAAGCTGCATGAGGACCTCCAT 3417052 Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519 | ||||| |||| |||||||| || Sbjct 3417053 AGCCCATTGGAACTCCAAACCTCTG 3417077 Score = 102 bits (112), Expect = 9e-17 Identities = 110/143 (77%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||||||||||||||| | |||||| || || ||||| Sbjct 3414149 TAAAAATGGTGCCAAGTGTTTCTTTACACCAATAGGACCCATGCCAGGGCCACCTCCTCC 3414208 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTC-AC 138276 ||| || || ||||||||||| || | ||| |||||||| |||||||| || || | || Sbjct 3414209 ATGAGGGATGCAGAATGTCTTGTGGAGATTGAGATGACAAACATCTGCTCC-TATCCAAC 3414267 Query 138277 ATGGTTTTGCTAGACCTACCTGT 138299 ||| ||| || || |||||| Sbjct 3414268 CTGGGCTTGTGAGTCCCACCTGT 3414290 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 122966 AGAATGTTCTTCGTATAGAAAGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGA 123025 ||||| || || || ||||||||||| || || || ||||| ||||| | || |||||| Sbjct 38350289 AGAATATTTTTGGTGTAGAAAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCTTGA 38350230 Query 123026 GATACAAAGTCGTATGCTCTGAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTC 123085 || || || || || || | | ||| || || | ||| || | || | || || Sbjct 38350229 GAAACGAAATCATAAGCACGTAAGTTCAGGGCCAAACCGACTACCCCAAGAGCACTCATC 38350170 Query 123086 CACATACCCATGACAGGAACGAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAAT 123145 || | ||| | || || || || ||||||| ||| ||||| | | ||| || ||||| Sbjct 38350169 CATAAACCAGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAA 38350110 Query 123146 GCGATACCAAATATCTGTGACCAGAA 123171 || | ||||| || || ||||| || Sbjct 38350109 GCAACCCCAAAGATTTGGGACCAAAA 38350084 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||||||||| ||||| ||||| | ||||| | | || || || | || || || || Sbjct 3417414 CATTGCCTCAGCTGCAGCAGTGCCCTCATCAAGCAATGAGGCATTGGACATGGGCAAGCC 3417473 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || ||||| | || |||||||| | | | || | || ||||||||||| Sbjct 3417474 AGTGAGGTCAGTGATCATGGTCTGGTAATTCAGCAGTGACTCAAGCCTCCCCTGAGATAT 3417533 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||| || || |||||||| ||||||||| ||| ||||| Sbjct 3417534 CTCAGCCTGGTAAGGAGTGTACTGAGTGTACCAAGCAGGGTTCTC 3417578 >seq9 Length=37469608 Score = 107 bits (118), Expect = 2e-18 Identities = 259/385 (67%), Gaps = 8/385 (2%) Strand=Plus/Minus Query 124483 CATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAA 124542 || ||| || ||||||| ||||| |||||||| || || || | |||||| ||||| Sbjct 1918262 CACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAATCATAAAATTGAA 1918203 Query 124543 AGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATAC 124602 |||||| | || || | ||||| ||||| || || || ||||||| || || | Sbjct 1918202 AGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACCAATAGGATAGAT 1918143 Query 124603 TAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACG 124662 ||||| ||| | | |||| | | || | |||||| |||||| |||||| || | Sbjct 1918142 CAAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGCAATCCAATGATG 1918083 Query 124663 CATTCCTAATCTGTATGAT-AGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAA-TA 124720 ||| || || | | | | | |||||||| | | |||||||| | | || || || Sbjct 1918082 CATACCCAAAC-GAAAGTTAAGTTCCCATTCACGACCCATGTAGCAAGCTACACTAAGTA 1918024 Query 124721 AGGAA-GTGGAA-AATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAG 124778 || || || ||| |||| | | ||||||||| | || || | |||||||||||| Sbjct 1918023 AGAAATGTAGAACAATT---AGTTCATAAGGACCGTCGTTGTATAGGCATTCATCAACAA 1917967 Query 124779 TTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTG 124838 | ||||||| || || || || || | | ||||| | | ||| | | Sbjct 1917966 AAGTCACTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAAGTATGAATAGTCG 1917907 Query 124839 CACCAGAGATGATGTTGTTACCATA 124863 ||||||| ||||| ||||| ||||| Sbjct 1917906 CACCAGAAATGATATTGTTTCCATA 1917882 Score = 95.1 bits (104), Expect = 1e-14 Identities = 172/245 (70%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 124744 ATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAA 124803 ||||||| | ||||| || ||||||||||||| | |||||||| || || || || Sbjct 33213763 ATAAGGATCGTTGTTATATAATCATTCATCAACAG-AGTCGCTTCCCATATAGGATAAAA 33213705 Query 124804 GTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATA 124863 || | || ||||| | || | |||| || ||||||||| ||||| || || ||||| Sbjct 33213704 ATGCAAACCTATAGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATA 33213645 Query 124864 TAAGAAAGAACCCGCTA-CTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAA 124922 ||| ||| | || | | ||||| | || || || ||||| | ||||| || ||| Sbjct 33213644 -AAGTAAGGATCCAAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAA 33213586 Query 124923 TAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCA 124981 |||| || | || || ||| | | ||| || | ||| ||||||| | ||||||| Sbjct 33213585 TAAAAGCGATAATAAATACA-GAAGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCA 33213527 Query 124982 AACCA 124986 ||||| Sbjct 33213526 AACCA 33213522 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || | ||||||||||| |||||||| Sbjct 12646404 TGAGCAGTGCAAATGTTGCTGGTGGCCTTGTCCCTGCGGATATGCTGCTCCCTAGTTTGC 12646463 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGA--CCTACAATTCTGC 139434 | || | ||| | || | || || || || ||||| || | || || | Sbjct 12646464 AAGGCCATTCTCAAAGCTGACTTTCCACAAGAATCAAC--ACTGATCCCAATGATCCTTC 12646521 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 |||| ||| | || ||||||| | || || || | ||| |||||||| ||||| || | Sbjct 12646522 CAGGCATCATCCTTTTATACTCTTGTGACGTGGCCAGGAACGCAGCATGTGGACCCCCAT 12646581 Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | ||||| |||| ||||| || || || || ||| ||||||| Sbjct 12646582 AACCCATTGGAACCCCAAATCTCTGAGTAGACCCAACAACAATATC 12646627 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||| ||||||||||| | ||||| || || ||||| Sbjct 12643732 TAAAAATGGTGCCAAGTGTTTCTTTACTCCAATAGGACCCATTCCAGGGCCACCTCCTCC 12643791 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||| || || || |||||||| || | ||| |||||||| |||||||| ||| Sbjct 12643792 ATGAGGGATGCAAAATGTCTTGTGGAGATTCAGATGACAAACATCTGCTCCA 12643843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993275864160