Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq9 167 3e-36
seq7 116 5e-21
>seq9
Length=37469608
Score = 167 bits (184), Expect = 3e-36
Identities = 463/700 (66%), Gaps = 30/700 (4%)
Strand=Plus/Minus
Query 8133 TGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTC 8192
|||||| || ||||| |||| |||| || |||||||||| | ||||| |||| | |
Sbjct 1918436 TGCATATTGAAAGATCAATCCGACAAAATAATCATGAGCAGCTATAATATCATAGATTTT 1918377
Query 8193 TTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGAT 8252
|| | ||||||||| || ||||| | || ||| || | | || |
Sbjct 1918376 GTCCTTTTGACCAAATTTGTAACCTTCATTAGCAGATTCAT--TAAGGT----------- 1918330
Query 8253 TAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACC 8312
|||| || ||||| ||| | | ||||||||||| || || || || | |||
Sbjct 1918329 ---AGAAA--GTTACTAAGGAATCATTTATAGCACTGAATAGGGAGTTGCCAAATACACC 1918275
Query 8313 TGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAA 8372
| || | | || || || ||||||||||||| |||||||| || ||||| |
Sbjct 1918274 AGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAAT 1918215
Query 8373 CATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACC 8432
||| || || || |||||| |||| |||| |||||||||||| || || || |||||
Sbjct 1918214 CATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACC 1918155
Query 8433 AAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACA 8492
|| ||||| | ||||| || | | | |||| | | |||| |||||| |||
Sbjct 1918154 AATAGGATAGATCAAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGC 1918095
Query 8493 GATCCATGGTCTCATACCTAAGCGGTATGATAA-CTCCCACTGTCTACCCATGTAAGCAG 8551
||||| | |||||| || | | | | ||| ||||| | | |||||||| |||
Sbjct 1918094 AATCCAATGATGCATACCCAAAC-GAAAGTTAAGTTCCCATTCACGACCCATGT-AGC-- 1918039
Query 8552 AAATTCCAATAAG---GAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608
|| | || |||| ||| || | | || | | ||| ||||| |||| || | |
Sbjct 1918038 AAGCTACACTAAGTAAGAAATGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGC 1917979
Query 8609 ACTCATCTA-ATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAA 8667
| ||||| | | | || ||||||| || ||||| || || || | ||||| ||
Sbjct 1917978 ATTCATCAACAAAAGTCA-CTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAA 1917920
Query 8668 G-ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGG 8726
| ||| | | | |||||||| ||||| ||||||||||| | | || || ||||||
Sbjct 1917919 GTATGAATAGTC-GCACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGG 1917861
Query 8727 TTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGT 8786
|| ||||||| || |||| || || || ||| | ||||| || | ||||| |
Sbjct 1917860 CTCGTGAATACCATCATTATCCACTGGAGGGGCAACGATAAAAGCGATAATAAATACAAA 1917801
Query 8787 AGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAAC 8826
|| | | ||||| ||||||||| | ||| ||||||
Sbjct 1917800 AGTTGTGGTTAACACAATAGGAATCATCAAAACACCAAAC 1917761
Score = 129 bits (142), Expect = 7e-25
Identities = 168/231 (73%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 8598 GTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAAT 8657
|||||| || || ||||| | | | | |||||||| || ||||| || || || || ||
Sbjct 33213751 GTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTAT 33213693
Query 8658 AGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACC 8717
||| |||||| |||| | |||||||| ||||| || |||||||| | || || ||
Sbjct 33213692 AGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCC 33213633
Query 8718 TGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGAT 8777
| |||||||||||||||| || ||||| | || |||||| ||||||| || | ||
Sbjct 33213632 AAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAAT 33213573
Query 8778 AAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCA 8828
||| || || |||| || || | ||||||| | ||| ||||||||
Sbjct 33213572 AAATACAGAAGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCAAACCA 33213522
>seq7
Length=51758522
Score = 116 bits (128), Expect = 5e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 8332 AAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCA 8391
|| |||||||||||||| |||||||| || || ||||| | ||| || || || ||||||
Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284
Query 8392 GAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAAC 8451
||||| |||| |||||| ||||| || || || ||||||| ||||| | |||||
Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224
Query 8452 ACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACC 8510
|| || ||| || | || ||||| |||||| ||| ||||| || | ||||||
Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACC 47750165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615856949617760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |