Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq9 167 3e-36 seq7 116 5e-21 >seq9 Length=37469608 Score = 167 bits (184), Expect = 3e-36 Identities = 463/700 (66%), Gaps = 30/700 (4%) Strand=Plus/Minus Query 8133 TGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTC 8192 |||||| || ||||| |||| |||| || |||||||||| | ||||| |||| | | Sbjct 1918436 TGCATATTGAAAGATCAATCCGACAAAATAATCATGAGCAGCTATAATATCATAGATTTT 1918377 Query 8193 TTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGAT 8252 || | ||||||||| || ||||| | || ||| || | | || | Sbjct 1918376 GTCCTTTTGACCAAATTTGTAACCTTCATTAGCAGATTCAT--TAAGGT----------- 1918330 Query 8253 TAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACC 8312 |||| || ||||| ||| | | ||||||||||| || || || || | ||| Sbjct 1918329 ---AGAAA--GTTACTAAGGAATCATTTATAGCACTGAATAGGGAGTTGCCAAATACACC 1918275 Query 8313 TGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAA 8372 | || | | || || || ||||||||||||| |||||||| || ||||| | Sbjct 1918274 AGTCACACTTAACACGTGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAAT 1918215 Query 8373 CATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACC 8432 ||| || || || |||||| |||| |||| |||||||||||| || || || ||||| Sbjct 1918214 CATAAAATTGAAAGTACCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACC 1918155 Query 8433 AAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACA 8492 || ||||| | ||||| || | | | |||| | | |||| |||||| ||| Sbjct 1918154 AATAGGATAGATCAAGAAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGC 1918095 Query 8493 GATCCATGGTCTCATACCTAAGCGGTATGATAA-CTCCCACTGTCTACCCATGTAAGCAG 8551 ||||| | |||||| || | | | | ||| ||||| | | |||||||| ||| Sbjct 1918094 AATCCAATGATGCATACCCAAAC-GAAAGTTAAGTTCCCATTCACGACCCATGT-AGC-- 1918039 Query 8552 AAATTCCAATAAG---GAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608 || | || |||| ||| || | | || | | ||| ||||| |||| || | | Sbjct 1918038 AAGCTACACTAAGTAAGAAATGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGC 1917979 Query 8609 ACTCATCTA-ATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAA 8667 | ||||| | | | || ||||||| || ||||| || || || | ||||| || Sbjct 1917978 ATTCATCAACAAAAGTCA-CTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAA 1917920 Query 8668 G-ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGG 8726 | ||| | | | |||||||| ||||| ||||||||||| | | || || |||||| Sbjct 1917919 GTATGAATAGTC-GCACCAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGG 1917861 Query 8727 TTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGT 8786 || ||||||| || |||| || || || ||| | ||||| || | ||||| | Sbjct 1917860 CTCGTGAATACCATCATTATCCACTGGAGGGGCAACGATAAAAGCGATAATAAATACAAA 1917801 Query 8787 AGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAAC 8826 || | | ||||| ||||||||| | ||| |||||| Sbjct 1917800 AGTTGTGGTTAACACAATAGGAATCATCAAAACACCAAAC 1917761 Score = 129 bits (142), Expect = 7e-25 Identities = 168/231 (73%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 8598 GTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAAT 8657 |||||| || || ||||| | | | | |||||||| || ||||| || || || || || Sbjct 33213751 GTTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTAT 33213693 Query 8658 AGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACC 8717 ||| |||||| |||| | |||||||| ||||| || |||||||| | || || || Sbjct 33213692 AGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCC 33213633 Query 8718 TGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGAT 8777 | |||||||||||||||| || ||||| | || |||||| ||||||| || | || Sbjct 33213632 AAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAAT 33213573 Query 8778 AAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCA 8828 ||| || || |||| || || | ||||||| | ||| |||||||| Sbjct 33213572 AAATACAGAAGTTGCAGTCAATAAAGTAAGAATCATCAAAACACCAAACCA 33213522 >seq7 Length=51758522 Score = 116 bits (128), Expect = 5e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 8332 AAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCA 8391 || |||||||||||||| |||||||| || || ||||| | ||| || || || |||||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 8392 GAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAAC 8451 ||||| |||| |||||| ||||| || || || ||||||| ||||| | ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 8452 ACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACC 8510 || || ||| || | || ||||| |||||| ||| ||||| || | |||||| Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACC 47750165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615856949617760