Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq6 185 1e-41 seq9 172 6e-38 seq2 154 2e-32 seq7 150 2e-31 seq1 129 7e-25 seq4 118 1e-21 seq8 116 4e-21 seq5 91.5 2e-13 >seq6 Length=31977256 Score = 185 bits (204), Expect = 1e-41 Identities = 490/738 (66%), Gaps = 23/738 (3%) Strand=Plus/Plus Query 167302 TGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTT 167361 ||| ||||||| | ||||| || || |||| | || ||| |||| | | || | | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 167362 GAACTTGCTCGCCTGATTGGTATCCGTCCCT---ACAATGCTATTGCTTTCTCTGGTCCT 167418 |||||||||| | || | | || | | |||| ||||| ||||| ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAATTACAACCTTATAATAATGTAATTGCATTCTCAGGTCCA 21888424 Query 167419 ATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTT 167478 |||| | | || ||| || |||||| | ||||| || ||||| | || |||||| Sbjct 21888425 ATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTTT 21888484 Query 167479 GCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCAC 167538 || || || | || || | || | | || || | || ||||| |||| || Sbjct 21888485 GCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCCAAAGATTTCAT 21888544 Query 167539 AACTGGACACTGAATCCATTTCATATGATGGGTGTAG-CA-GGTATCCTGGGTGGTGCAT 167596 | |||||| | || |||||||||||| |||| || | || |||| |||||| |||| Sbjct 21888545 ACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTAT--TGGGTGTTGCAC 21888602 Query 167597 TGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAG 167656 | || | || || ||||||| || ||||| | |||||| | |||||||||||| | Sbjct 21888603 TACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGGTG 21888662 Query 167657 CAAACACTTTTAAGGCATTCGATTCTACTCAGGAAG-AAGAGACTTATTCAATGGTTACA 167715 ||| || ||| || || | | || || | || | || ||||||||| |||| Sbjct 21888663 AAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTACT 21888722 Query 167716 GCAAACCGATTCTGGTCTCAGATCTTCGGCATTG-CTTTCAGCAACAAACGCTGGCTTCA 167774 | || || || ||||| || ||||| || ||| |||| || || | ||| | || Sbjct 21888723 GTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTACA 21888782 Query 167775 TTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCG--ATTGGCATCATT 167832 ||| |||||||| || || || || | | ||| || | | |||| || || Sbjct 21888783 TTTATTTATGTTGTTTGTACCAGTAACTCG--TTTATGAATGAGTGTTCTTGGGATAGTT 21888840 Query 167833 GGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAG 167892 ||| | | | || || |||||||| ||||||||||||||||| ||| | || Sbjct 21888841 GGTTCGTCCTTGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGC------- 21888893 Query 167893 GATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCA 167952 || ||| ||| | ||||| || |||||||| || | | || |||||| |||| ||| Sbjct 21888894 AAT--AGA-TTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTGCA 21888950 Query 167953 TGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCA 168012 ||| | || || |||| ||||||| |||||| | |||| || || ||||| || Sbjct 21888951 TGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCTATCA 21889010 Query 168013 CGAGGCAACGCACTATAA 168030 || | ||| | || ||| Sbjct 21889011 CGTGAAAACACTCTTTAA 21889028 >seq9 Length=37469608 Score = 172 bits (190), Expect = 6e-38 Identities = 376/563 (67%), Gaps = 0/563 (0%) Strand=Plus/Plus Query 165778 TGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCA 165837 ||| | ||||||| | || | ||| || | | | ||||||| |||||||||| Sbjct 1917723 TGGATAACCAGCATCGAAAATCTTCTTTACATATGATTGTTTGGTGTTTTGATGATTCCT 1917782 Query 165838 ACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGAC 165897 | | |||| | ||||| | || || |||| || |||| ||| || || ||||| Sbjct 1917783 ATTGTGTTAACCACAACTTTTGTATTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGAT 1917842 Query 165898 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCT 165957 | || || || | || || || ||| || || | ||||| ||||| ||||| ||| Sbjct 1917843 AATGATGGTATTCACGAGCCTGTTTTTGGATCCCTACTTTATGGAAACAATATCATTTCT 1917902 Query 165958 GGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCC 166017 ||||| | ||| ||| || || | | | || || ||||| || ||||||| Sbjct 1917903 GGTGCGACTATTCATACTTTTGCGGCTATAGATTTGCATTTTTATCCTATATGGGAAGTG 1917962 Query 166018 GCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTC 166077 | | |||| ||||| || || |||| ||||||| |||| |||| | || ||| Sbjct 1917963 ACTTTTGTTGATGAATGCCTATACAACGACGGTCCTTATGAACTAATTGTTCTACATTTC 1918022 Query 166078 CTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATG 166137 | || | | | ||||||||||||||| |||||||| | ||| | |||||| Sbjct 1918023 TTACTTAGTGTAGCTTGCTACATGGGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATG 1918082 Query 166138 CGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTA 166197 | || ||||| |||||| || ||| | || | || |||| | || || ||| | Sbjct 1918083 CATCATTGGATTGCTGTTGCATATTCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTG 1918142 Query 166198 GTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACA 166257 | |||||| | |||||||| || || || |||| |||||| | ||||| | || || Sbjct 1918143 ATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACT 1918202 Query 166258 TTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATG 166317 ||||| | ||| | || || || |||||| |||||||| ||||||| || || || Sbjct 1918203 TTCAATTTTATGATTGTATTTCAGATTGAGCATAATATTCTTATGCATCAATTTCACGTG 1918262 Query 166318 CTCGGCGTTGCTGGGGTATTTGG 166340 | | || |||| |||||||| Sbjct 1918263 TTAAGTGTGACTGGTGTATTTGG 1918285 >seq2 Length=49040938 Score = 154 bits (170), Expect = 2e-32 Identities = 240/340 (71%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 167693 AAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTT 167752 |||| |||||||||||||| || || || || ||||| || ||||| || |||||| Sbjct 27893024 AAGAAACTTATTCAATGGTAT--GCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTT 27893081 Query 167753 TCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGA 167812 | ||| | ||||||||||||||||| || || || || || | |||| Sbjct 27893082 TTTCCAATTA----------CATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGA 27893131 Query 167813 CATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTT-CGTGCTTACGATTTCGTTTCT 167871 | || | || | ||| ||| ||| | ||| |||||||| |||||||||||| Sbjct 27893132 TGAGTGCTCTTAGGATAGTCGGTTAGGC-CTTGACCTTACGTGCTTATGATTTCGTTTCT 27893190 Query 167872 CAAGAGA-TCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCT 167930 ||||| | | | || ||||| ||||| || ||||| | ||| || || ||||| || || Sbjct 27893191 CAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCT 27893250 Query 167931 TCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGT 167990 | || |||||| |||| | ||| | ||| || ||||| | |||||| ||| || | Sbjct 27893251 CTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTAT 27893310 Query 167991 GTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 27893311 ATTCCCTGAGGAGGTTCTACCACGTGGTAACGCTCTTTAA 27893350 >seq7 Length=51758522 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154 ||||||||||||||| || ||||| || ||||| ||||||||||| ||||| ||| Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 47750187 Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214 ||| || ||||| || || || || || | ||| || ||| | | |||||| | ||||| Sbjct 47750188 TGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCA 47750247 Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 ||| || || || |||| ||||| | ||||| || || || ||||| | ||| | || Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTT 166310 || || |||||||| |||||||| |||||||| || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 |||| | |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 1496722 TCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 1496663 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 1496662 GTTCGAATCCTACTTGGGGAG 1496642 >seq1 Length=52205531 Score = 129 bits (142), Expect = 7e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 167722 CGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTT 167781 || || ||||| || ||||| || ||||||| ||| ||||| ||| | ||||||||| Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 167782 ATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCT 167841 |||||||| || || || | || | |||| | |||| | | ||| |||| Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 167842 CTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAG 167901 || || | |||||||| ||||||||||||||||| ||| | || ||||| ||||| || Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 167902 TTTGAAACTTTCTATACTAAAAACATCCT 167930 ||||| |||||||| || ||||| || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCT 38350289 >seq4 Length=45960019 Score = 118 bits (130), Expect = 1e-21 Identities = 145/194 (75%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 167839 GCTCTTAATCTT-CGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCC 167897 |||| | | ||| |||||||| ||||||||||||||||| ||| | || | | ||| | Sbjct 43482219 GCTCCTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGC-ATGAAAGATTC 43482277 Query 167898 AGAGTTTGAAACTTTCTATAC-TAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGT 167956 || ||||| ||||| || || ||||| || || | || |||||| |||| || ||| Sbjct 43482278 TGAATTTGATACTTTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGA 43482337 Query 167957 TAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAG 168016 | ||| | ||||| |||||||| ||| || | ||||| ||||| ||||| ||||| | Sbjct 43482338 TGGCAATTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTG 43482397 Query 168017 GCAACGCACTATAA 168030 | ||||| || ||| Sbjct 43482398 GAAACGCTCTTTAA 43482411 >seq8 Length=59662532 Score = 116 bits (128), Expect = 4e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 166616 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 166675 |||| || |||||||| ||| | ||||| |||| |||||||| | || |||||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 166676 ATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 166735 || || ||||||| ||| || ||||||||||| |||||||| ||||| || || || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 166736 TCCCCCTCGACCTCGCTGC 166754 |||| || || || ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 >seq5 Length=40819286 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||| Sbjct 7641526 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 7641467 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 7641466 CCTACTTGGGGAG 7641454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561243032955200