Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq9 183 9e-42 seq7 154 4e-33 >seq9 Length=37469608 Score = 183 bits (202), Expect = 9e-42 Identities = 484/728 (66%), Gaps = 27/728 (4%) Strand=Plus/Plus Query 41318 ACAACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATC 41374 ||||||| | ||||||||||| ||| | | || || || || || | ||||| || Sbjct 1917795 ACAACTTTTGTATTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATT 1917854 Query 41375 CGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTT 41434 | || || || ||| ||||| | ||||| ||||| ||||| || || || || Sbjct 1917855 CACGAGCCTGTTTTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATT 1917914 Query 41435 CCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGAT 41494 | | | || || | | || || || || || ||||||| || ||||| Sbjct 1917915 CATACTTTTGCGGCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGAT 1917974 Query 41495 GAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTC 41554 ||||| || ||||||| |||||| | |||| | || | || ||| | || | || Sbjct 1917975 GAATGCCTATACAACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTA 1918034 Query 41555 T-TTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 ||||| ||||||| || || |||||||||| || ||| | || ||| | ||||| Sbjct 1918035 GCTTGCT-ACATGGGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGAT 1918093 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTT 41673 |||||| || || |||||| || |||| | || ||| ||| | | ||||| | Sbjct 1918094 TGCTGTTGCATATTCAACTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTAT 1918153 Query 41674 TGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACAT 41733 ||| || || ||||| |||| ||||| || || || | || || ||||| | || Sbjct 1918154 TGGTCAAGGAAGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTAT 1918213 Query 41734 GCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGC 41793 | | || || ||| |||||| |||||||||||||||| |||||| || | ||||| | Sbjct 1918214 GATTGTATTTCAGATTGAGCATAATATTCTTATGCATCAATTTCACGTGTTAAGTGTGAC 1918273 Query 41794 CGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACT 41853 || |||||||| | ||| |||||| | || | | | || ||| Sbjct 1918274 TGGTGTATTTGGCAACTCCCTATTCAGTGCTATAAA--------TGATTCCTTAGTAACT 1918325 Query 41854 CATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGA 41913 ||| || || | | | || || | |||||||| ||||||||| |||| Sbjct 1918326 --TTC----TAC--CTTA--ATGAATCTGCTAATGAAGGTTACAAATTTGGTCAAAAGGA 1918375 Query 41914 AGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTT-ATCTTCCAATATG 41972 | | || ||||| | |||||||| | |||||| ||||| || ||||| ||||||| Sbjct 1918376 CAAAATCTATGATATTATAGCTGCTCATGATTATTTT-GTCGGATTGATCTTTCAATATG 1918434 Query 41973 CTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTA 42032 | || || |||||||| ||| | || |||| || || | || ||| |||| |||||| Sbjct 1918435 CAAGTTTCAATAATTCTCGT-TTTTTAATTTTTTCCTAGTTGTTTGG-CTGTAATAGGTA 1918492 Query 42033 TTTGGTTT 42040 |||||||| Sbjct 1918493 TTTGGTTT 1918500 >seq7 Length=51758522 Score = 154 bits (170), Expect = 4e-33 Identities = 168/222 (76%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 41556 TTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCT 41615 ||||| ||||||| || || || |||||||| | ||| || || ||| | || ||||| Sbjct 47750125 TTGCT-ACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTG 47750183 Query 41616 TTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTG 41675 |||||| || || |||||||| || || || |||||||| ||| | | ||||| ||| Sbjct 47750184 CTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTG 47750243 Query 41676 GACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGC 41735 | || || ||||| |||| |||||| || || || || || || ||||| | ||| Sbjct 47750244 GTCAAGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGA 47750303 Query 41736 TGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTC 41777 | || || ||||||||||| ||||||||||||||||| |||| Sbjct 47750304 TTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTC 47750345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146213170702432