Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq9 181 3e-41 seq7 145 2e-30 seq8 96.9 1e-15 >seq9 Length=37469608 Score = 181 bits (200), Expect = 3e-41 Identities = 363/530 (68%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 42336 GTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTT 42394 ||||||||| |||||||||| | || | | | || ||| |||||| |||||| Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTT-TGTATTTATTATCGCTT 1917819 Query 42395 TCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTC 42454 | || | ||||||||| || || | |||||| |||| || ||||| | ||| || || | Sbjct 1917820 TTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTAC 1917879 Query 42455 TGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTAC 42514 | ||||| ||||| ||||| |||||||| | | || | || || | | | Sbjct 1917880 TTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGC 1917939 Query 42515 ATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTT 42574 |||| ||| | || ||||||| | | |||| ||||| || ||||| | ||| |||| Sbjct 1917940 ATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTT 1917999 Query 42575 ATCAGCTCGTCGTGTTCCAC-TTCCTTA--TCG-GTATCTTCTCTTACTTGGGACGCGAA 42630 || | || | ||||| || || |||| | | ||| ||| ||| |||| || ||| Sbjct 1918000 ATGAACTAAT--TGTTCTACATTTCTTACTTAGTGTAGCTTGC--TACATGGGTCGTGAA 1918055 Query 42631 TGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCT 42690 ||||||||| | || | || ||| | ||||| |||||| || || | ||| Sbjct 1918056 TGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCT 1918115 Query 42691 GTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGAT 42750 | || || | | || || ||| | ||||||| |||| ||||| ||||| ||| Sbjct 1918116 GATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGAT 1918175 Query 42751 GGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACAT 42810 ||||||||| | || |||| ||||| ||||| || ||| | || || ||| ||| ||| Sbjct 1918176 GGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCAT 1918235 Query 42811 AACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 || ||||||||||||| || || || | |||| | || |||||||| Sbjct 1918236 AATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGG 1918285 Score = 114 bits (126), Expect = 4e-21 Identities = 188/267 (70%), Gaps = 3/267 (1%) Strand=Plus/Plus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 |||||||||| | | || | || || |||||||| | | ||||||||||| || Sbjct 33213477 TTTTGTAACTAGATAACCAGCATAAAAAATCGTCTTTACATAAGATGGTTTGGTGTTTTG 33213536 Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCCC 42407 ||||||| | | | |||| || | ||| |||||| ||||||| |||| ||| || Sbjct 33213537 ATGATTCTTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTATTGTTGCTCC 33213595 Query 42408 TCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAA 42467 ||| |||| |||||||| ||||||||||||| | ||| || | || ||||| || || Sbjct 33213596 TCCATTAGATATTGATGGTATTCGTGAACCTGATTTTGGATCCTTACTTTATGGAAATAA 33213655 Query 42468 CATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGAT 42527 ||||| |||||||| | | |||| | || || || | ||||| ||| | || Sbjct 33213656 TATCATTTCTGGTGCAATTATTCCTACTTCCACGGCTATAGGTTTGCATTTTTATCCTAT 33213715 Query 42528 CTGGGAAGCCAATACCCTTGACGAATG 42554 |||||||| | | | |||| ||||| Sbjct 33213716 ATGGGAAGCGACT-CTGTTGATGAATG 33213741 >seq7 Length=51758522 Score = 145 bits (160), Expect = 2e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42616 TACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTT 42675 ||| |||| || ||||| |||||| | || || || ||| | || ||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 42676 GCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAA 42735 || || || || ||||| || || || ||||| || ||| | ||||||| |||| ||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 42736 GGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTC 42795 || ||||| ||||| |||||| | || ||||| ||||| ||||| || ||| | || Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 42796 TTCCAGGCTGAACATAACATTCTTATGCATCCTTT 42830 || |||||||| ||||| |||||||||||||| || Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 96.9 bits (106), Expect = 1e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 43136 GTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTG 43195 ||||||| || |||||||| | ||||||| ||| || ||| || ||| ||||||| Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 43196 ATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACT 43255 ||||| | || || || |||||||| | || || ||||| || || ||||| ||||| | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 43256 TCCCGCTTGATCTTGC 43271 |||| || ||||| || Sbjct 31293340 TCCCTCTAGATCTAGC 31293355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143531593247984