Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq9 113 1e-20 seq7 113 1e-20 seq8 93.3 1e-14 >seq9 Length=37469608 Score = 113 bits (124), Expect = 1e-20 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Minus Query 26315 TGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTA 26374 || ||| | ||||| || |||||||| || || ||||| | |||||| || |||||| Sbjct 1918258 TGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAATCATAAAATTGAAAGTA 1918199 Query 26375 CCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAG 26434 ||| | || || | |||||||||||| ||| || ||||| || | |||||| | ||| Sbjct 1918198 CCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAG 1918139 Query 26435 AACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATT 26494 || || | | | | || | || | || |||||||||| ||||| | ||| Sbjct 1918138 AAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGCAATCCAATGATGCATA 1918079 Query 26495 CCTAGTCTGTAAGAT-AGTTCCCACTGTCTCCCTGCATAT-GC-TGCTACTCCTATTAAG 26551 || | | | ||| | |||||||| | | || ||| | || ||||| | | |||| Sbjct 1918078 CCCAAAC-GAAAGTTAAGTTCCCATTCACGACC--CATGTAGCAAGCTACACTAAGTAAG 1918022 Query 26552 AAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTCGTCCA-GTGTGCC 26610 || || | | ||| |||| ||| || ||| | |||||||| || || || | | | Sbjct 1918021 AAATGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGCATTCATCAACAAAAGTC 1917962 Query 26611 AGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTG-CGTTAGAGGAGGGGACGACTGCTC 26669 | ||||||| || || |||||||| | | || | || | || | | | | || | Sbjct 1917961 A-CTTCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAAGTATGAATAGTC-GCAC 1917904 Query 26670 CTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTA 26729 | || || ||||||||||| || | || || || |||| ||||| | || ||||| Sbjct 1917903 CAGAAATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGCTCGTGAATACCATCAT 1917844 Query 26730 TATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA 26766 |||| || || || || |||| || || | ||||| Sbjct 1917843 TATCCACTGGAGGGGCAACGATAAAAGCGATAATAAA 1917807 >seq7 Length=51758522 Score = 113 bits (124), Expect = 1e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 26318 AATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCA 26377 ||||| ||||| || |||||||| || || || ||||| | |||||| || ||||||||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 26378 GAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAAC 26437 || || || | |||||| ||||| ||| || ||||| || | |||||| | ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 26438 ACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCT 26497 || || ||| || | | || |||| |||||||||| ||||| || | ||| || Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 26498 AG 26499 || Sbjct 47750163 AG 47750162 >seq8 Length=59662532 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || || |||||||||||||| || ||||| ||||| | || |||||| Sbjct 31293355 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGGTTA 31293296 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | ||||||||| ||| ||||| || | | ||| ||||| || Sbjct 31293295 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGAT 31293236 Query 25997 TGGTTAAAGTTAAAAC 26012 ||||| || ||||||| Sbjct 31293235 TGGTTGAAATTAAAAC 31293220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147710758111360