Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq9 131 5e-26 seq7 107 6e-19 seq8 86.0 2e-12 >seq9 Length=37469608 Score = 131 bits (144), Expect = 5e-26 Identities = 358/546 (66%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 40971 TGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTT 41030 || ||| | ||||| ||||| || || || || || |||| ||| || ||||| || Sbjct 1918258 TGAAATTGATGCATAAGAATATTATGCTCAATCTGAAATACAATCATAAAATTGAAAGTA 1918199 Query 41031 CCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAG 41090 ||| |||||||||||||| ||||| || || || ||||| | ||||| | ||| Sbjct 1918198 CCATAAATTCCTAAAGGCATTCCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAG 1918139 Query 41091 AATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTCATA 41150 || ||| | | | | |||| |||| || ||||| ||| ||||| | |||| Sbjct 1918138 AAAACAACAATAACAGCTGCATCAGGAGTTGAATATGCAACAGCAATCCAATGATGCATA 1918079 Query 41151 CCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAG 41210 || | | | ||||||||| | | ||| ||| ||||| | | ||| || Sbjct 1918078 CCCAAACGAAAGTTAAGTTCCCATTCACGACCCATGTAGCAAGCTACACTAAGTAAGAAA 1918019 Query 41211 TGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCT 41270 || | ||||| |||| ||| || ||| |||||||||| || || || | || Sbjct 1918018 TGTAGAACAATTAGTTCATAAGGACCGTCGTTGTATAGGCATTCATCAACAAAAGTCACT 1917959 Query 41271 TCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGAT 41330 ||||| || || || ||||| | | || || | | | ||| || ||||| Sbjct 1917958 TCCCATATAGGATAAAAATGCAAATCTATAGCCGCAAAAGTATGAATAGTCGCACCAGAA 1917899 Query 41331 ATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCT 41390 || |||||||| || || | || || || |||| ||||| | || ||||| |||| Sbjct 1917898 ATGATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGCTCGTGAATACCATCATTATCC 1917839 Query 41391 ACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGG 41449 || || || || ||||||| ||||| || || ||| || | |||| | || Sbjct 1917838 ACTGGAGGGGCAACGATAAAAGCGATAATAAATACA-AAAGTTGTGGTTAACACAATAGG 1917780 Query 41450 AATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTT 41509 |||||| | ||||||||| | | || ||| || | || ||| |||| || | |||||| Sbjct 1917779 AATCATCAAAACACCAAACAATCATATGTAAAGAAGATTTTCGATGCTGGTTATCCAGTT 1917720 Query 41510 ACAAAA 41515 | |||| Sbjct 1917719 ATAAAA 1917714 Score = 105 bits (116), Expect = 2e-18 Identities = 202/294 (69%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 41223 AGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGG 41282 |||| ||| || || ||| |||| || || || | | | || ||||||| || || Sbjct 33213768 AGTTCATAAGGATCGTTGTTATATAATCATTCATCAACAGAGTCG-CTTCCCATATAGGA 33213710 Query 41283 TAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTC 41342 || ||||| | || || || | || | |||| | || ||||| || ||||| || Sbjct 33213709 TAAAAATGCAAACCTATAGCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTT 33213650 Query 41343 CCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCT 41402 || || | ||| || || || | || ||||| || ||||| ||||||| || || || Sbjct 33213649 CCATAAAGTAAGGATCCAAAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCA 33213590 Query 41403 GCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCAC 41461 | ||||| ||||| || || ||| | || ||||| | ||| | ||||||| | || Sbjct 33213589 ACAATAAAAGCGATAATAAATACA-GAAGTTGCAGTCAATAAAGTAAGAATCATCAAAAC 33213531 Query 41462 ACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||||||| | || ||| || || || | |||| || | | |||||||||| Sbjct 33213530 ACCAAACCATCTTATGTAAAGACGATTTTTTATGCTGGTTATCTAGTTACAAAA 33213477 >seq7 Length=51758522 Score = 107 bits (118), Expect = 6e-19 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 40974 AATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCA 41033 ||||| ||||| ||||| || || || || || || |||| ||| || ||||| || ||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 41034 CTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAAT 41093 |||||||||||||||||||| || || || ||||| | ||||| | ||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 41094 ACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCT 41153 ||||| ||| |||| | ||||||| ||||| ||| ||||| || | |||||| Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 41154 AG 41155 || Sbjct 47750163 AG 47750162 >seq8 Length=59662532 Score = 86.0 bits (94), Expect = 2e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| |||||||| || || ||||| ||||| || ||||| ||||||||||| || | Sbjct 31293356 AGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGGTT 31293297 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 || ||||| || ||||||||| ||| || || ||| | | || ||||| || Sbjct 31293296 AGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGA 31293237 Query 40652 CTGGTTAAAGTTAAAAC 40668 ||||| || ||||||| Sbjct 31293236 TTGGTTGAAATTAAAAC 31293220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143701191822072