Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq7 138 1e-27 seq9 109 6e-19 seq8 86.0 7e-12 >seq7 Length=51758522 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 67803 AATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCA 67862 ||||| |||||||| || || ||||| || || || || | ||| | || ||||||||| Sbjct 47750343 AATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCA 47750284 Query 67863 GAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAAC 67922 ||||| || | |||||| | || || || |||||||| | |||||||| |||||| Sbjct 47750283 GAAATTCCTAAAGGCATACCATCCGAAAAGCTTCCTTGACCAATAGGATAGATCAAGAAA 47750224 Query 67923 ACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCA 67982 ||||| || || | || ||||| || ||||| ||| ||||||||||||||||| Sbjct 47750223 ACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCC 47750164 Query 67983 AGACGGTAAGAAAGTTCCCACTGACGACC 68011 ||||| || |||||| || | |||||| Sbjct 47750163 AGACGAAAACTAAGTTCTCATTCACGACC 47750135 >seq9 Length=37469608 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 68070 TTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATT 68129 ||||| || || ||||| | || | |||||||| |||||||| || || | ||| || Sbjct 33213750 TTATATAATCATTCATCAACAGAGTC-GCTTCCCATATAGGATAAAAATGCAAACCTATA 33213692 Query 68130 GCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCT 68189 || | ||| |||||| || |||||||||||||| || || || || | | || || Sbjct 33213691 GCCGTGGAAGTAGGAATAATTGCACCAGAAATGATATTATTTCCATAAAGTAAGGATCCA 33213632 Query 68190 GCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATG 68249 | ||||||| | |||||||| ||||| | |||||| || |||| || || || || Sbjct 33213631 AAATCAGGTTCACGAATACCATCAATATCTAATGGAGGAGCAACAATAAAAGCGATAATA 33213572 Query 68250 AAGCAAGTTGCTGCTG-CGAGCAAGCAAGGAATCATCAACACACCGAACCA 68299 || || | ||| | | | ||| || |||||||||| ||||| ||||| Sbjct 33213571 AATACAGAAGTTGCAGTCAATAAAGTAA-GAATCATCAAAACACCAAACCA 33213522 >seq8 Length=59662532 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/142 (74%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| || || |||||||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 31293358 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATGACTTCCATACCAAGG 31293299 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACG 67475 |||| ||||| || || ||||| ||| || || || |||| ||||| Sbjct 31293298 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTAC---ACGACCTTGACTATCAACT 31293242 Query 67476 ACGGATTGGTTGAAGTTGAAAC 67497 |||||||||||||| || |||| Sbjct 31293241 ACGGATTGGTTGAAATTAAAAC 31293220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566942182517280