Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 136 7e-27 >seq3 Length=52284309 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| ||||| ||||| || | || | ||| || ||||||||| ||| Sbjct 30274358 ATACCACCTCTCAAACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTATAATCG 30274299 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | |||||| || |||||||| | ||||| ||||| ||| Sbjct 30274298 GCAAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCTGGA 30274239 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| || || | ||| | ||| ||| || || || || || Sbjct 30274238 GGGATACCCTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCAGACGATTCT 30274179 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || || || | ||||| || ||||| ||||| Sbjct 30274178 ACCTCGAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCAT 30274129 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | ||||| || || |||| |||| || || |||||| ||||| | Sbjct 30379319 ACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGC 30379260 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || | | ||| || ||||| || || |||||||| | ||||| ||||| || || Sbjct 30379259 CAAGGTACGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGG 30379200 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || || || || || || || |||| ||| | ||| ||| ||||| || ||| || Sbjct 30379199 GATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTATCAGAGCTCTCCAC 30379140 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || | || || || || ||||| || || || |||||||||||||| Sbjct 30379139 CTCCAATGTAATGGTCTTCCCTGTCAGGGTCTTCACAAATATTTGCAT 30379092 Score = 89.7 bits (98), Expect = 9e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || ||||||||||| || | ||||||||||| || ||||| ||||| || || || || Sbjct 30379009 TGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCCTGAATC 30378950 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | ||| | ||| ||| ||||| || || || || | || || || || ||| Sbjct 30378949 TTTGCTTTCACATTGTCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTCTTTCCT 30378890 Query 193335 GTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || ||||||||||||||| Sbjct 30378889 GTCAGAGTCTTCACAAATATTTGCATT 30378863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899646438058560