Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 >seq3 Length=52284309 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | || || |||| ||||| || ||||| || || || ||| || Sbjct 30378863 AATGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTC 30378922 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| ||| || |||||| || || || || || ||||||||||| ||||| || Sbjct 30378923 TGATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30378982 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || | || | |||||| |||||||| |||||| | || | | |||||||| Sbjct 30378983 ACAGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAA 30379042 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 ||| || || | || ||||| || ||||| Sbjct 30379043 TATCCAGAAGGAATCCACTCTTCACTTGGTGTT 30379075 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| ||||| | ||||| |||||||| || || || || | || || ||| ||| Sbjct 30309559 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30309618 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || ||| ||| || || || ||||| || || ||||| || || Sbjct 30309619 GACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAG 30309678 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| ||| ||||| || || || ||| ||||| | ||||||||||| Sbjct 30309679 CAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCAGATTATAAT 30309738 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| | || || || || ||| | | |||||||| || Sbjct 30309739 ATTCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTAAGAGGTGG 30309785 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| ||||| | ||||| |||||||| || || || || | || || ||| ||| Sbjct 30274129 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30274188 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||| || ||||| ||||| || || |||||||| || Sbjct 30274189 GACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAAGAGGGTATCCCTCCAGATCAG 30274248 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| ||| ||||| || || || ||| ||||| | | ||||||||| Sbjct 30274249 CAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCCGATTATAAT 30274308 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || || || | ||| | | || ||||| ||| Sbjct 30274309 ATTCAGAAGGAGTCCACCCTCCACCTGGTGCTTCGTTTGAGAGGTGGT 30274356 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || ||||| ||||| || ||||| || || || ||| ||| Sbjct 30284455 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATTACTTTGGAGGTTGAAAGTTC 30284514 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || || ||||| || || || || || ||||||||||| ||||| || Sbjct 30284515 TGACACCATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCA 30284574 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||| || | || | ||| || |||||||| |||||| Sbjct 30284575 ACAGAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGAT 30284611 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| || ||||| ||||| || || || || ||| Sbjct 30284228 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30284287 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || |||||| || || || ||||| || || || || ||||| || Sbjct 30284288 GACACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 30284347 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | |||||| || ||||| |||||| ||||| | | ||||||||| Sbjct 30284348 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 30284407 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037 || ||||| | || || || || || || || Sbjct 30284408 ATCCAGAAAGAATCTACTCTGCACTTGGTTTTGAG 30284442 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||||||| || || || || || || || ||| Sbjct 30274357 ATGCAGATTTTTGTGAAGACTTTGACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274416 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || ||||| || || ||||| ||||| || || Sbjct 30274417 GATACCATTGATAATGTAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGATCAG 30274476 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| ||||| ||||| || ||| ||||| | | ||||||||| Sbjct 30274477 CAGAGGCTGATATTTGCTGGTAAACAGCTTGAGGATGGAAGAACCCTTGCCGATTATAAT 30274536 Query 156003 AT 156004 || Sbjct 30274537 AT 30274538 Score = 86.0 bits (94), Expect = 9e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| || ||||| ||||| || || || || ||| Sbjct 30378408 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30378467 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| || || || || || || || || || ||||| || Sbjct 30378468 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 30378527 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||||| |||||| ||||| | | ||||||||| Sbjct 30378528 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTGGCGGATTATAAT 30378587 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037 || || ||| | || | || ||||| || || Sbjct 30378588 ATTCAGAAGGAGTCCACTTTGCACTTAGTTTTGAG 30378622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731865522932800