Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 seq9 214 2e-50 seq2 168 7e-37 seq1 152 6e-32 seq7 143 3e-29 seq8 138 1e-27 seq4 132 5e-26 seq11 95.1 1e-14 >seq6 Length=31977256 Score = 226 bits (250), Expect = 3e-54 Identities = 438/641 (68%), Gaps = 14/641 (2%) Strand=Plus/Plus Query 152740 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 152799 |||| ||||| ||||| ||||| || | | |||||||| || || || || || || Sbjct 21888401 AATGTAATTGCATTCTCAGGTCCAATTGTTATTTTTGTTTATGTATTCCTTATTTATCCA 21888460 Query 152800 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTC 152859 |||||||| | |||| || || ||||| ||| | ||||| | || | | || Sbjct 21888461 CTGGGTCAGTTTGGTTGATTCTTTGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATC 21888520 Query 152860 CTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTT 152919 | | || | ||| |||| || | |||||||| || || ||||||||| |||| ||| Sbjct 21888521 ATCATATTTTTCCAAAGATTTCATACTTGGACATTAAACCCATTTCATATGCTGGGAGTT 21888580 Query 152920 GCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACT 152979 | | | ||||| | || | || | || |||||||||| || ||||| | |||| Sbjct 21888581 GTCATTGTATTGGGTGTTGCACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACT 21888640 Query 152980 TTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGAA 153039 || | | |||||||||| | ||| || || ||||| || || ||| ||| Sbjct 21888641 TTATTTGAAGATGGTGATGGTGAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAA 21888700 Query 153040 GAGA-CCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTT 153098 | | ||||||| ||| |||||| ||| || || |||||||| || ||||| ||| ||| Sbjct 21888701 AAAAACCTATTCAATGATTACTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTT 21888760 Query 153099 TAGC-AATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGA 153157 | | ||||| | ||| | ||||| |||||| |||||||||| || | || | || | Sbjct 21888761 TCTCTAATAAGCATTGGTTACATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAA 21888820 Query 153158 CCTCTTCTATTGGAATCATTGGT-CTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCT 153216 | | |||| || ||||| | | || | || || |||||||| ||||| || ||| Sbjct 21888821 TGAGTGTTCTTGGGATAGTTGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCT 21888879 Query 153217 CAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTT 153276 ||||||||| | || || | |||| |||| || || || || ||||| | Sbjct 21888880 CAAGAAATCTGTGC-----AA-----TAGATTTAAGACTTTATACACTAAAAATATTTTC 21888929 Query 153277 TTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTG 153336 || ||||||||| ||||||| ||| || || || | || ||||||| ||||| | Sbjct 21888930 TTAAACGAAGGTATTCGTGCATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATA 21888989 Query 153337 TTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCTGTGATA 153377 |||| ||||||||| | |||| | ||| |||| | ||| Sbjct 21888990 TTCCTTGAAGAGGTTCTATCACGTGAAAACACTCTTTAATA 21889030 Score = 105 bits (116), Expect = 7e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 152004 TACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGT 152063 ||||| | |||||||| |||||| |||| |||| | ||||| || | |||||| Sbjct 31674092 TACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATGCAGGGCTGGT 31674151 Query 152064 GCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCA 152123 | || || || |||||||| || ||||| |||| ||| || ||| ||| Sbjct 31674152 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTCTGATGGTAAC 31674211 Query 152124 TTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACT 152183 ||| | ||||| ||||| |||||| ||| || || || ||||||||||| ||||| ||| Sbjct 31674212 TTCCTTGATGACGACCAAATTGAACAAGGCTTTGTTCTCACCTGTGTTGCTTATCCCACT 31674271 Query 152184 TCTGATGT 152191 |||||||| Sbjct 31674272 TCTGATGT 31674279 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 152004 TACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGT 152063 ||||| | |||||||| |||||| |||| |||| | ||||| || | |||||| Sbjct 31665056 TACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATGCAGGGCTGGT 31665115 Query 152064 GCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCA 152123 | || || || |||||||| || ||||| |||| ||| || ||| ||| Sbjct 31665116 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTCTGATGGTAAC 31665175 Query 152124 TTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACT 152183 ||| | ||||| ||||| ||||| ||| || || || ||||| ||||| ||||| ||| Sbjct 31665176 TTCCTTGATGACGACCAAATTGAGCAAGGCTTTGTTCTCACCTGCGTTGCTTATCCCACT 31665235 Query 152184 TCTGATGT 152191 |||||||| Sbjct 31665236 TCTGATGT 31665243 >seq9 Length=37469608 Score = 214 bits (236), Expect = 2e-50 Identities = 368/528 (70%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 150886 GTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATT 150945 ||| ||||| |||||||||| | | |||| | |||| || || || | || || Sbjct 1917761 GTTTGGTGTTTTGATGATTCCTATTGTGTTAACCACAACTTTTGTATTTATTATCGCTTT 1917820 Query 150946 CATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGAT 151005 |||| ||| || || ||||| | ||||| || | || || ||| ||| || || | Sbjct 1917821 TATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTACT 1917880 Query 151006 GTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCA 151065 || || ||||| ||||| |||||||| | ||| | ||| | ||||| | | |||| Sbjct 1917881 TTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGCA 1917940 Query 151066 CTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTT 151125 || ||||| || ||||||| | | | | |||||||| || ||||||| ||||||| Sbjct 1917941 TTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTTA 1918000 Query 151126 CCAACTCGTTGTCTTCCACTTCCTGATTGGTAT--CTATGCTTACATGGGTCGTGAGTGG 151183 |||| |||| | || ||| | || || | || |||| ||||||||||||| ||| Sbjct 1918001 TGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCT-TGCT-ACATGGGTCGTGAATGG 1918058 Query 151184 GAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGT 151242 ||||| | || |||||||||| || ||||| ||| |||||||| || |||| | Sbjct 1918059 GAACTTAACTTTCGTTTGGGTATGCATCATTGGAT-TGCTGTTGCATATTCAACTCCTGA 1918117 Query 151243 TGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGC 151302 ||| |||| | || || ||| | |||||||| | |||||||| || || |||| Sbjct 1918118 TGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGG 1918177 Query 151303 AATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAA 151362 |||||| | || |||| ||| || ||||| | ||| |||| || || ||||| || Sbjct 1918178 AATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAA 1918237 Query 151363 CATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGG 151410 ||||| ||||| | || || || | ||||| ||||||| || || Sbjct 1918238 TATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGG 1918285 >seq2 Length=49040938 Score = 168 bits (186), Expect = 7e-37 Identities = 241/336 (72%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 153038 AAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTT 153097 |||| || ||||| ||||| |||||| || || |||||||| || ||||| |||||| Sbjct 27893024 AAGAAACTTATTCAATGGTA--TGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTT 27893081 Query 153098 TTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGA 153157 || |||| | |||||||||||| | |||||||| || || ||| | |||| Sbjct 27893082 TTTCCAATTA----------CATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGA 27893131 Query 153158 CCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTT-CGTGCTTACGATTTTGTATCT 153216 | || || | || | ||| || || | ||| |||||||| ||||| || ||| Sbjct 27893132 TGAGTGCTCTTAGGATAGTCGGTTAGGC-CTTGACCTTACGTGCTTATGATTTCGTTTCT 27893190 Query 153217 CAAGAAATCAGG-GCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCT 153275 |||||||| | || | ||||||||||||||||| | || || || || ||||| || Sbjct 27893191 CAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCT 27893250 Query 153276 TTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGT 153335 || ||||||||| |||||| ||| | ||| || || || | |||||| ||| | | Sbjct 27893251 CTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTAT 27893310 Query 153336 GTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 |||||||| ||||| | ||||| || |||||||| Sbjct 27893311 ATTCCCTGAGGAGGTTCTACCACGTGGTAACGCTCT 27893346 >seq1 Length=52205531 Score = 152 bits (168), Expect = 6e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 153067 CGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTT 153126 || || |||||||| || ||||| |||||||| ||||||||| ||| | ||||||||| Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 153127 ATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCT 153186 ||| | |||||||| || | ||| | |||| | || |||| | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 153187 CTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAA 153246 || || | |||||||| ||||| || |||||||||||| | || | |||||||||||| Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 153247 TTTGAGACGTTCTATACGAAGAATATCCTTTT 153278 |||||||| ||||| || || ||||| || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCTCTT 38350292 >seq7 Length=51758522 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GT 151224 |||||||||||||| || ||||| || || ||||||||||||| ||||| ||| || Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT-TGCTGT 47750187 Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284 |||||| || ||||| ||||| || || | ||| || ||| | |||||||| | ||||| Sbjct 47750188 TGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCA 47750247 Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344 ||| || || |||| ||||| | || |||||||| || ||||| | ||| |||| Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTT 151380 || || || ||||| || ||||| ||||| || || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 138 bits (152), Expect = 1e-27 Identities = 186/258 (72%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 153049 TCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAA 153108 || |||||||||||||| || || |||||||| || ||||| |||||||| || Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTC---AT--- 1232818 Query 153109 CGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATT 153168 ||| | |||||||||||| | |||||||| || | ||| | || | | || || Sbjct 1232817 ---TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 153169 GGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGG 153228 || | | ||| | || | || | ||||||| ||||| || |||||||||||| | Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 153229 GCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGT 153288 || | ||| |||||||||||||||| ||| | | || ||||| || || || ||||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTCTCTTAAA--AAGGT 1232643 Query 153289 CTTCGTGCTTGGTTGGCA 153306 ||||||| ||| ||||| Sbjct 1232642 ATTCGTGCGTGGATGGCA 1232625 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 151686 GTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAG 151745 |||| || |||||||| ||| | | ||| |||| || || | || |||||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 151746 ACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACT 151805 | || | ||||| || || ||||||||||| ||||| || ||||||||||| || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 151806 TCCCTCTCGACCTTGCTGC 151824 ||||||| || || ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 >seq4 Length=45960019 Score = 132 bits (146), Expect = 5e-26 Identities = 137/177 (77%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 153196 CGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACG 153255 |||||||| ||||| || |||||||||||| | || | | ||||| |||||||||| || Sbjct 43482232 CGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGCATGA-AAGATTCTGAATTTGATACT 43482290 Query 153256 TTCTATAC-GAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGA 153314 || || || || ||||| || || ||||||||| ||||||| ||| ||||| | || Sbjct 43482291 TTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAATTCAAGA 43482350 Query 153315 CCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 || |||||||| ||| | | |||||||| ||||| | ||||| || |||||||| Sbjct 43482351 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 43482407 >seq11 Length=50367376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 153046 TATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAAT 153105 ||||| ||||||||| |||| || || |||||||| || ||||| |||||||| |||| Sbjct 3718489 TATTCAATGGTTACTCCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 3718548 Query 153106 AAACGCTGGCTTCATTTCTTTATGCTGTTTGTACC 153140 |||| ||| | |||||||||||| | |||||||| Sbjct 3718549 AAACATTGGTTACATTTCTTTATGTTATTTGTACC 3718583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549617535841760