Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 241 2e-57 seq2 96.9 4e-14 >seq1 Length=52205531 Score = 241 bits (266), Expect = 2e-57 Identities = 229/293 (78%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| || || | |||| | |||||| Sbjct 45626700 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGGGCCTCGGAGACTTGG 45626641 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 | ||||||||||| ||| |||| ||||| ||| ||||| |||||| |||||| || Sbjct 45626640 ATTTCCTTCATGAAGCGGGCGGCGAGGTTTTCGAGAACGATACCGTCGGAGGCGGCAAAG 45626581 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||||||| |||| |||||||||||| ||||| |||| || |||||||| | Sbjct 45626580 AAGGCGAGGACGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCGG 45626521 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 ||| | ||||| ||||| ||||||||||||| ||||| ||||| || |||||| Sbjct 45626520 AGGTCTTGGGAAAGGTCAACCTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTAC 45626461 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 || ||||||| ||| |||| |||| ||||| | | ||||||| ||||| Sbjct 45626460 ATTTCCCATATTTGGGGGTATTGGATTGGGAACATGCAGAAGCGGTCTGGGTT 45626408 Score = 210 bits (232), Expect = 3e-48 Identities = 212/273 (78%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||||||||||||||| |||||||| ||||| | |||| | || ||| Sbjct 19482888 GAGTGAATGTTCTCGATGGCGATCTGAAAGCCGTAGAAGGCGCGGGCCTCGGAGACCTGG 19482947 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||| |||||||| ||||| || |||||||| ||| ||||||||| Sbjct 19482948 ACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCCATCGGAGGCGGCGAAG 19483007 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||||||| |||| || ||||||||| | ||| | || | | |||| || | Sbjct 19483008 AAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAGAGTCTCCCAATGCCGG 19483067 Query 869813 GTGT-CGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 ||| | ||| |||||| |||||||| || ||||||| ||||| || || || ||||| Sbjct 19483068 ATGTCCTGCG-AGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCAGCTTTCTTGTA 19483126 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 ||| ||||| | ||| |||| |||| ||||| Sbjct 19483127 CATTTCCCAGATTTGGGGGTATTGGATTGGGAA 19483159 Score = 150 bits (166), Expect = 2e-30 Identities = 234/333 (70%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| ||||| |||||| ||||||||| |||||| ||||||||||| || Sbjct 19482281 GGACATGACGGAAGCCTTCTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCC 19482340 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCA 868797 || ||||| || | ||||||||| ||||||||| || ||||| |||| |||| Sbjct 19482341 CTGCAGCGAAATAAGCTCCATCCAATCGAACGGGTTCTGCACATTGTACAGCTTCCCGCA 19482400 Query 868798 TCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC 868857 || |||| |||||| | || || |||||||| |||||| | ||| | | | | Sbjct 19482401 CCCAAGCGCACCGAGCAACCTATCAGCAACAAACTCAATGTACACACTCATCAAGGCCCC 19482460 Query 868858 GTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGAC 868917 |||||| || | | ||| || |||| |||| |||||||| ||||||| || || Sbjct 19482461 GTTCATCCCCACCAACGCGCAAGGAAGCGCGTCGCAGACAAACTCCCTCTCGATGTCAAC 19482520 Query 868918 GGCCTCGACGATGATCTGCCTGGGCACG---TCGGCCGAGGGCTTGTTGACGAGCATCGT 868974 || ||| | ||||| ||| |||| || | | | ||||||| | || | Sbjct 19482521 TGCATCGCGCACGATCTCCCT---CACGCGCTCCTCGGGGAGCTTGTTCCGCATGATAGA 19482577 Query 868975 GTAGAGCAGGCAGGCAAAGTCGCAGTGCAACCC 869007 |||||||||||| || ||||||||||| | ||| Sbjct 19482578 GTAGAGCAGGCACGCGAAGTCGCAGTGGAGCCC 19482610 Score = 136 bits (150), Expect = 5e-26 Identities = 181/252 (72%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 869200 TTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCA 869259 ||||||| |||| ||| |||||||| | ||||||||||||||||| || || | ||| Sbjct 45626959 TTCGTTGGAGAAGGTGAGACCGGGCATCAAACCGCGCTTCTTGAGCCAGAATATCGAGCA 45626900 Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAA 869319 ||| ||||| ||||| ||||| ||||||||| ||| ||| ||| || |||||||| || Sbjct 45626899 GAAGCTGCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAGGCGACGATGCGCTCGGCGAA 45626840 Query 869320 GGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGA 869379 | |||| | | || |||||| || ||||| | ||||| || || | Sbjct 45626839 AGAGTCGGTGGC------GTCGATCCAGCGCAAGGCCCACTGTGCCTTCTTGGCGACGCA 45626786 Query 869380 CGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGT 869439 || | ||||| | ||| || || ||||||| |||||||| | ||| |||| ||||| Sbjct 45626785 GGGGATGGTGTCTACGGCACGGAACAGGTGGTTCTTTTCGGTGGAGTCTTTGATGTAGGT 45626726 Query 869440 GTCGATCAGGAG 869451 || | ||||| Sbjct 45626725 TTCCAAGAGGAG 45626714 Score = 113 bits (124), Expect = 6e-19 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | ||||||| |||| || || ||||||||||| |||||| Sbjct 19482609 CCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGTCCCGGCATGAGGCCTCGCTTC 19482668 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| | ||| || || || ||||| ||||| ||||||||| ||| ||| Sbjct 19482669 TTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCGACGCAGGCGAAG 19482728 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | || |||||||| |||| ||| | || |||||| | |||||| Sbjct 19482729 GCAACGATGCGCTCGGCGAAGGACTCG------GCGGAGTCGATCCAGCGTAGGGCCCAG 19482782 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAG 869406 | ||||| || | || | || | ||||| |||||| | ||||| Sbjct 19482783 TTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGTGGAAGAG 19482829 >seq2 Length=49040938 Score = 96.9 bits (106), Expect = 4e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| |||||||| ||||| |||||| ||| || |||| || || Sbjct 21329718 GCTGCGAACTACCTGAACATCAAGAGCCTGCTGGATCTTACATGCCAGACTGTAGCAGAC 21329659 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || ||||| || ||||||||||||||||| ||| Sbjct 21329658 ATGATCAAGGGGAAGACTCCAGAGGAAATTCGCAAGACCTTTAACATTAAG 21329608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107081098204436