Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 199 6e-45 seq7 113 7e-19 >seq1 Length=52205531 Score = 199 bits (220), Expect = 6e-45 Identities = 229/307 (75%), Gaps = 7/307 (2%) Strand=Plus/Minus Query 794361 TTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACA 794420 ||||||| ||| ||| |||||||| | ||||||||||||||||| || || | || Sbjct 45626959 TTCGTTGGAGAAGGTGAGACCGGGCATCAAACCGCGCTTCTTGAGCCAGAATATCGAGCA 45626900 Query 794421 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAA 794480 ||| ||||| ||||| ||||| ||||||||| ||| ||| |||||| |||||||| || Sbjct 45626899 GAAGCTGCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAGGCGACGATGCGCTCGGCGAA 45626840 Query 794481 AGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGA 794540 || ||| | | || |||||| || ||||||| |||||| || || | Sbjct 45626839 AGAGTCGGTGGC------GTCGATCCAGCGCAAGGCCCACTGTGCCTTCTTGGCGACGCA 45626786 Query 794541 GGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGT 794600 ||| | ||||| | ||| || || ||||||| ||| ||| | ||| |||| |||||| Sbjct 45626785 GGGGATGGTGTCTACGGCACGGAACAGGTGGTTCTTTTCGGTGGAGTCTTTGATGTAGGT 45626726 Query 794601 GTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATA 794660 || | |||||| ||| |||| ||||||||||| |||||||||||||||||||| || Sbjct 45626725 TTCCAAGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTA 45626666 Query 794661 -AAAGCA 794666 |||||| Sbjct 45626665 GAAAGCA 45626659 Score = 190 bits (210), Expect = 3e-42 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| ||||||| ||||||||||||||| |||| ||||| || ||||| || Sbjct 45626656 GGCCTCGGAGACTTGGATTTCCTTCATGAAGCGGGCGGCGAGGTTTTCGAGAACGATACC 45626597 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 |||| |||||| || |||||||||||||| |||| ||||| |||||| ||||| |||| Sbjct 45626596 GTCGGAGGCGGCAAAGAAGGCGAGGACGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAG 45626537 Query 796269 CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 ||| |||||||| ||| | ||||| ||||| ||||||||||| || ||||| Sbjct 45626536 GGAGTCCCAGTGGCGGAGGTCTTGGGAAAGGTCAACCTCTTCGGCGGTCCAGAAAGAGGC 45626477 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||||| || |||||||| |||||||| | |||| |||| ||||||| Sbjct 45626476 TTCGGCTTTCTTGTACATTTCCCATATTTGGGGGTATTGGATTGGGAACA 45626427 Score = 174 bits (192), Expect = 2e-37 Identities = 181/233 (78%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || ||||||||||||||||| |||||||| ||||| ||| |||||||| Sbjct 19482932 GGCCTCGGAGACCTGGACCTCCTTCATGAAACGGCCGGCAAGGTTTTCAAGGACGATGCC 19482991 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 ||| ||||||||| |||||||||||||| |||| || || |||||| | ||| | || Sbjct 19482992 ATCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAATGGCGCTCGCCATCGGTTAG 19483051 Query 796269 CGAGACCCAGTGGACCG--TGT-CGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 | |||| || ||| ||| | ||| ||||||||||||||| || ||||| || || Sbjct 19483052 AGTCTCCCAATG--CCGGATGTCCTGCG-AGAGGTCGACCTCCTCCGCCGTCCAGAAAGA 19483108 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| || || || |||||||| ||||| || | |||| |||| ||||||| Sbjct 19483109 GGCTTCAGCTTTCTTGTACATTTCCCAGATTTGGGGGTATTGGATTGGGAACA 19483161 Score = 161 bits (178), Expect = 2e-33 Identities = 231/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | ||||||| ||| || || ||||||||||| |||||| Sbjct 19482609 CCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTAAGTCCCGGCATGAGGCCTCGCTTC 19482668 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | || || || || ||||| ||||| ||||||||| ||| ||| Sbjct 19482669 TTGAGCCAGAAGATAGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCGACGCAGGCGAAG 19482728 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| |||||||| || | || || | || |||||| | ||||| Sbjct 19482729 GCAACGATGCGCTCGGCGAAGGACTC--GG----CGGAGTCGATCCAGCGTAGGGCCCAG 19482782 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| || | || |||| | ||||| |||||| | ||||| || |||||| Sbjct 19482783 TTAGCCTTCTTGGTGACGCAGGGAATAGTGTCAATGGCGTGGAAGAGACGGGTCTTCTCT 19482842 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||| || | |||||| || | |||||| ||| |||| ||||| ||||| ||| Sbjct 19482843 TTGGAGTCTTTTATGTAGGTTTCAAGGAGGAGGCTGTACATCTCGGAGTGAATGTTCTCG 19482902 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||| ||||| || ||| Sbjct 19482903 ATGGCGATCTGAAAGCCGTAGAAG 19482926 Score = 134 bits (148), Expect = 2e-25 Identities = 218/311 (70%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| ||||||||| |||||| ||||||||||| |||| ||||| || | ||||||| Sbjct 19482303 TACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATAAGCTCCATC 19482362 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 || ||||||||| | ||| ||||| ||||||| |||| | |||| | Sbjct 19482363 CAATCGAACGGGTTCTGCACATTGTACAGCTTCCCGCACCCAAGCGCACCGAGCAACCTA 19482422 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || || || || ||||||||| | ||| | ||| ||||||| || | | ||| Sbjct 19482423 TCAGCAACAAACTCAATGTACACACTCATCAAGGCCCCGTTCATCCCCACCAACGCGCAA 19482482 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCT- 794146 || |||| |||| ||||||||| ||||||| || || || ||| | ||||| ||| Sbjct 19482483 GGAAGCGCGTCGCAGACAAACTCCCTCTCGATGTCAACTGCATCGCGCACGATCTCCCTC 19482542 Query 794147 --GGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 | || | |||| || |||||| | || | |||||||||||| || |||||| Sbjct 19482543 ACGCGCTCCTCGG-GGA--GCTTGTTCCGCATGATAGAGTAGAGCAGGCACGCGAAGTCG 19482599 Query 794205 CAATGCAGACC 794215 || || || || Sbjct 19482600 CAGTGGAGCCC 19482610 >seq7 Length=51758522 Score = 113 bits (124), Expect = 7e-19 Identities = 169/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||||||||| || || |||||||||||| | || ||||| || | | || Sbjct 35953809 ACTTGGTGACGGCCTTGGTGCCTTCCGAGACGGCGTGCTTAGCGAGTTCTCCTGGGAGGA 35953750 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGT--GTTGCGCTTGTTAGTGCG 1485590 || || || ||||||||||||||||||| ||| || ||| |||||| ||| Sbjct 35953749 CAAGACGGACAGCGGTCTGGATCTCGCGGGATGTGATAGTAGGTT--TCTTGTTGTAGCG 35953692 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | | | || | ||| || | ||||| |||| || |||||| Sbjct 35953691 GGCGAGTCTGGATGATTCCTGGGCGAGCTTCTCAAAGATGTCATTGATGAAGCTGTTCAT 35953632 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||| | ||| ||||||| || | ||| ||||| ||||| ||||| |||||| Sbjct 35953631 GATCCCCATTGCCTTGCTGGAGATCCCTATGTCAGGGTGGACCTGTTTGAGAACCTTG 35953574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916171086810812