Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 118 8e-22 seq7 82.4 6e-11 >seq3 Length=52284309 Score = 118 bits (130), Expect = 8e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || |||||||| || || ||||| ||| | || |||| | Sbjct 30274585 ATGCAAATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274644 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || |||||| || || || ||| | || ||||||| Sbjct 30274645 GATACCATTGATAATGTCAAGGCCAAGATTCAAGACAAGGAGGGCATCCCTCCGGATCAG 30274704 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||||| ||| ||||||||||| || |||| | ||| | ||||| || ||| Sbjct 30274705 CAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATAAC 30274764 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 || || ||||| || || ||||| |||| ||||| Sbjct 30274765 ATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAG 30274799 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || |||||||| || || ||||| ||| | || |||| | Sbjct 30309787 ATGCAGATTTTTGTGAAGACTTTAACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30309846 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || ||| ||||| || || || ||| | || ||||||| Sbjct 30309847 GATACCATTGATAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGATCAG 30309906 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||||| ||| ||||||||||| || |||| | ||| | ||||| || ||| Sbjct 30309907 CAGAGGCTTATTTTTGCTGGTAAACAGCTTGAAGACGGTAGAACCCTTGCGGATTATAAC 30309966 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 || || ||||| || || ||||| |||| ||||| Sbjct 30309967 ATCCAGAAGGAATCCACTCTGCACTTGGTTTTGAG 30310001 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| ||||| || || |||||||||||| | || |||| | Sbjct 30378408 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30378467 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || ||| |||||| || || || || | ||| || ||| Sbjct 30378468 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 30378527 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| || |||||||| || || | | ||| ||||||| || || Sbjct 30378528 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTGGCGGATTATAAT 30378587 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 ||||| |||||||| || |||||| | || ||||| Sbjct 30378588 ATTCAGAAGGAGTCCACTTTGCACTTAGTTTTGAG 30378622 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| ||||| || || |||||||||||| | || |||| | Sbjct 30284228 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCTTGGAGGTGGAGAGTTCA 30284287 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| |||||| ||||| || || | ||| || ||| Sbjct 30284288 GACACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 30284347 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| || |||||||| || || | | ||| | ||||| || || Sbjct 30284348 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 30284407 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || || || || ||||| ||||| |||| ||||| | || || |||| Sbjct 30284408 ATCCAGAAAGAATCTACTCTGCACTTGGTTTTGAGGCTTCGTGGTGGAA 30284456 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || ||| | ||||| |||||||||||| | || |||| ||| Sbjct 30284683 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30284742 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||||| | | | || ||| ||||||| || ||||||||| | || |||| Sbjct 30284743 T-GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATC 30284801 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| ||||||| ||| || ||||| |||| || | || |||| ||||||| Sbjct 30284802 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 30284861 Query 107734 ACATTCAAAAGGAGTCTAC 107752 | ||||| ||||| || || Sbjct 30284862 ATATTCAGAAGGAATCCAC 30284880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || ||| | ||||| |||||||||||| | || |||| ||| Sbjct 30314981 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 30315040 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||||| | | | || ||| ||||||| || || || ||| | || |||| Sbjct 30315041 T-GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATCCCACCAGATC 30315099 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| ||||||| ||| || ||||| |||| || | || |||| ||||||| Sbjct 30315100 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 30315159 Query 107734 ACATTCAAAAGGAGTCTAC 107752 ||||||| ||||| || || Sbjct 30315160 ACATTCAGAAGGAATCCAC 30315178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || ||||| || || || ||||| ||| | || |||| | Sbjct 30274357 ATGCAGATTTTTGTGAAGACTTTGACTGGAAAGACCATAACCTTGGAGGTGGAGAGTTCA 30274416 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | ||||| ||||| || || || ||| | || ||||||| Sbjct 30274417 GATACCATTGATAATGTAAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGATCAG 30274476 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| ||||||||||| ||||| | | ||| | || || || || Sbjct 30274477 CAGAGGCTGATATTTGCTGGTAAACAGCTTGAGGATGGAAGAACCCTTGCCGATTATAAT 30274536 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 ||||| | ||| || || ||||| |||| ||||| Sbjct 30274537 ATTCAGATGGAATCCACCCTGCACTTGGTTTTGAG 30274571 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || ||| | ||||| || ||||||||| | || |||| ||| Sbjct 30275039 AATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTC 30275098 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||||| | | | || ||| ||||||| || || || ||| | || |||| Sbjct 30275099 T-GATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATC 30275157 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| ||||||| ||| || ||||| |||| || | || |||| ||||||| Sbjct 30275158 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 30275217 Query 107734 ACATTCAAAAGGAGTCTAC 107752 ||||||| ||||| || || Sbjct 30275218 ACATTCAGAAGGAATCCAC 30275236 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || ||| | ||||| || ||||||||| | || |||| ||| Sbjct 30310242 AATGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTC 30310301 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||||| | | | || ||| ||||||| || || || ||| | || |||| Sbjct 30310302 T-GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATC 30310360 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| ||||||| ||| |||||||| |||| || | || |||| ||||||| Sbjct 30310361 AGCAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 30310420 Query 107734 ACATTCAAAAGGAGTCTAC 107752 ||||||| || || || || Sbjct 30310421 ACATTCAGAAAGAATCCAC 30310439 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || |||||||| || ||||| ||||| ||| |||| || | Sbjct 30309559 ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCT 30309618 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | || ||| ||||| || ||||| || | || ||||||| Sbjct 30309619 GACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAG 30309678 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || |||| ||| |||||||| || ||||| | | ||| | || || || || Sbjct 30309679 CAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCAGATTATAAT 30309738 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| || | ||| ||||| Sbjct 30309739 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 30309768 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| ||||| || || | ||||| || |||||||| | || |||| ||| Sbjct 30379092 ATGCAAATATTTGTGAAGACCCTGACAGGGAAGACCATTACATTGGAGGTGGAGAGCTCT 30379151 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| |||||| || || || ||| | || ||||| Sbjct 30379152 -GATACAATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCACCAGATCA 30379210 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || || ||||||| | || |||| |||||||| Sbjct 30379211 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAGGATGGTCGTACCTTGGCAGACTACAA 30379270 Query 107735 CATTCAAAAGGAGTCTACGTTGCAC 107759 ||||| ||||| ||||| ||||| Sbjct 30379271 TATTCAGAAGGAATCTACCCTGCAC 30379295 >seq7 Length=51758522 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| || ||| | || ||||| ||||| ||| |||| |||| ||| Sbjct 4236982 ATGCAGATCTTTGTGAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 4237041 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || ||||| || || || || | ||| ||| || Sbjct 4237042 -GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATACCCCCGGACCA 4237100 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | || || |||||||||||||| | | || | || ||||| || Sbjct 4237101 GCAGAGGTTGATCTTCGCTGGAAAACAGCTGGAGGATGGAAGGACCCTCGCCGACTATAA 4237160 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||| || |||||||| || | ||| |||||||| Sbjct 4237161 CATCCAGAAGGAGTCAACTCTCCACTTGGTGTTG 4237194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398873358191812