Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=52284309 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| || || || || || || || | || |||||| | Sbjct 30309560 TGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCTG 30309619 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||| || || ||||| || || || || ||||| | Sbjct 30309620 ACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAGC 30309679 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||||||| | || ||| ||||| | |||||||||||| Sbjct 30309680 AGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCAGATTATAATA 30309739 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || || |||| || || | || |||||||| || Sbjct 30309740 TTCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTAAGAGGTGG 30309785 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| || || || || || || || | || |||||| | Sbjct 30274130 TGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCTG 30274189 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||| || ||| ||||| || || || || ||||| | Sbjct 30274190 ACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAAGAGGGTATCCCTCCAGATCAGC 30274249 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||||||| | || ||| ||||| | | |||||||||| Sbjct 30274250 AGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAGAACCCTTGCCGATTATAATA 30274309 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || |||| | || | || || ||||| |||| Sbjct 30274310 TTCAGAAGGAGTCCACCCTCCACCTGGTGCTTCGTTTGAGAGGTGGTA 30274357 Score = 95.1 bits (104), Expect = 2e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| ||||| ||||| | || || || | Sbjct 30284685 TGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTCTG 30284744 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || || ||||||||||| ||||| ||||| | Sbjct 30284745 ATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAAGAAGGCATCCCACCAGATCAGC 30284804 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||||| || ||| | | || || |||| || |||| Sbjct 30284805 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAATA 30284864 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || || ||||| || |||| Sbjct 30284865 TTCAGAAGGAATCCACCCTCCA 30284886 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || | |||||||| || ||||| | || || ||| | Sbjct 30378865 TGCAAATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAAAGCTCTG 30378924 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || || || |||||||| ||||| ||||||| Sbjct 30378925 ATACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATACCACCAGATCAAC 30378984 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || || || | || ||| | || | | |||||||||| Sbjct 30378985 AGAGGCTTATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGTACCCTTGCTGATTATAATA 30379044 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || || ||||| ||| | || || || || ||| | | || |||| ||||||| Sbjct 30379045 TCCAGAAGGAATCCACTCTTCACTTGGTGTTGCGACTTCGTGGTGGTATGCAAATATT 30379102 Score = 89.7 bits (98), Expect = 8e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || || || | Sbjct 30310244 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTCTG 30310303 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || || || || ||||||||||| ||||| | Sbjct 30310304 ATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAGC 30310363 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||||||||| || ||| | | || || |||| || || | Sbjct 30310364 AGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 30310423 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || |||||||| || |||| Sbjct 30310424 TTCAGAAAGAATCCACCCTCCA 30310445 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || || || | Sbjct 30275041 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTCTG 30275100 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || ||| || || ||||||||||| ||||| | Sbjct 30275101 ATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCAGC 30275160 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||||| || ||| | | || || |||| || || | Sbjct 30275161 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 30275220 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || || ||||| || |||| Sbjct 30275221 TTCAGAAGGAATCCACCCTCCA 30275242 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| || || || || || || || | || |||||| | Sbjct 30314071 TGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAACCCTCGAGGTAGAATCGTCTG 30314130 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || ||| || || ||| || || || || ||||| || || | Sbjct 30314131 ACACCATTGATAACGTGAAAGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAGC 30314190 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| ||||| ||| | || ||| | | || | | ||||| |||| Sbjct 30314191 AGAGACTTATCTTTGCGGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGATTACAATA 30314250 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | ||||||||||| ||| |||| Sbjct 30314251 TCCAAAAAGAATCCACTCTCCA 30314272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786159442427360