Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq6 226 3e-54 seq9 168 7e-37 seq7 150 2e-31 seq1 138 1e-27 seq8 116 4e-21 >seq6 Length=31977256 Score = 226 bits (250), Expect = 3e-54 Identities = 491/723 (68%), Gaps = 29/723 (4%) Strand=Plus/Plus Query 159063 TGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTT 159122 |||| |||||| | ||||| ||||| |||| |||| ||| |||| | | || | | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 159123 GAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCT---ATTGCGTTCTCTGGTCC 159178 ||||| || | | | || | | | || || ||| | ||||| ||||| ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAAT-TACAACCTTATAATAATGTAATTGCATTCTCAGGTCC 21888423 Query 159179 TATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTT 159238 |||| | ||||||| || |||||||| || ||||| ||||||| |||| || || Sbjct 21888424 AATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTT 21888483 Query 159239 CGCTCCGTCCTTTGGGGTGGCCGC-AATATTCAGGT--TCCTACTCTTCCTACAAGGGTT 159295 ||||| ||| | || || ||| |||| | || || | |||| || | || Sbjct 21888484 TGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCC---AAAGATT 21888540 Query 159296 CCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGC--TGGTATCCTAGGTGGA 159353 || | ||||||| ||||||| || |||||| ||||||||| | |||| | |||| Sbjct 21888541 TCATACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTAT--TGGGTGTT 21888598 Query 159354 GCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAA 159413 ||||| |||| ||||||||||| | || || |||| ||| |||| || ||||| || Sbjct 21888599 GCACTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGAT 21888658 Query 159414 CAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAA-GAGGAGGAGACTTATTCTATGGT 159472 | ||| || ||| || ||| | |||| ||| | | | || ||||| ||| | Sbjct 21888659 GGTGAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGAT 21888718 Query 159473 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTT-TCTAACAAGCGGTGGC 159531 |||| || ||||| ||||| || ||||| || ||| ||| ||||| |||| ||| Sbjct 21888719 TACTGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGT 21888778 Query 159532 TTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTA 159591 | ||||| |||||||||||||| || || | || |||| | | |||| || Sbjct 21888779 TACATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTCTTGGGATAG 21888838 Query 159592 TTGG-TCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCA 159650 |||| || | || | || || |||||||| |||||||| |||||| ||| | ||| | Sbjct 21888839 TTGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATA 21888897 Query 159651 GAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGT 159710 | |||| | || || ||||| || || ||| | | || ||||| | ||| Sbjct 21888898 G----------ATTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGT 21888947 Query 159711 GCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTA 159770 || ||| || || || |||| | ||||||||||| || |||| ||||| |||||| Sbjct 21888948 GCATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGTTCTA 21889007 Query 159771 CCA 159773 || Sbjct 21889008 TCA 21889010 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 158212 AGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTG 158271 ||| ||| ||||||||| || || ||||| |||| ||| |||| || ||||| || Sbjct 31674082 AGATGATGCATACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATG 31674141 Query 158272 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158331 | |||||| |||||||||||||||| || ||| |||| ||| || || ||| Sbjct 31674142 CAGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTC 31674201 Query 158332 TGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGC 158391 |||| ||||| || || || ||||| | | ||| |||||||| || ||||| || Sbjct 31674202 TGATGGTAACTTCCTTGATGACGACCAAATTGAACAAGGCTTTGTTCTCACCTGTGTTGC 31674261 Query 158392 ATATCCAACATCTGATTGTGTTGTTGTTACTGATCAAGAGGAG 158434 ||||| || |||||| |||| |||| || | | |||||| Sbjct 31674262 TTATCCCACTTCTGATGTTGTTATTGTCACCCACAAGGAGGAG 31674304 Score = 113 bits (124), Expect = 5e-20 Identities = 161/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 158212 AGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTG 158271 ||| ||| ||||||||| || || ||||| |||| ||| |||| || ||||| || Sbjct 31665046 AGATGATGCATACATTCTTGATGCTGCAGAGGAAGAAGGCATTGACCTTCCTTACTCATG 31665105 Query 158272 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158331 | |||||| |||||||||||||||| || ||| |||| ||| || || ||| Sbjct 31665106 CAGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGGTGGCCAAGTGGACCAGTC 31665165 Query 158332 TGATCAGTCGTTCCTAGACGATGATCAAATCGCAGC-AGGATTTGTTCTTACGTGTGTAG 158390 |||| ||||| || || || ||||| | ||| ||| |||||||| || || || | Sbjct 31665166 TGATGGTAACTTCCTTGATGACGACCAAATTG-AGCAAGGCTTTGTTCTCACCTGCGTTG 31665224 Query 158391 CATATCCAACATCTGATTGTGTTGTTGTTACTGATCAAGAGGAG 158434 | ||||| || |||||| |||| |||| ||| | | |||||| Sbjct 31665225 CTTATCCCACTTCTGATGTTGTTATTGTCACTCACAAGGAGGAG 31665268 >seq9 Length=37469608 Score = 168 bits (186), Expect = 7e-37 Identities = 312/458 (68%), Gaps = 0/458 (0%) Strand=Plus/Plus Query 157165 GCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGC 157224 || ||||| || |||| || ||||||| ||| || ||| ||| || || | ||||| Sbjct 1917828 GCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTACTTTATGGA 1917887 Query 157225 AACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTAC 157284 ||||| ||||| |||||||| | ||| | ||| || || | | | || || || Sbjct 1917888 AACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGCATTTTTAT 1917947 Query 157285 CCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTG 157344 || || ||||||| | | ||||||| || || ||||||| ||||||| |||| Sbjct 1917948 CCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTTATGAACTA 1918007 Query 157345 GTAGTCTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCT 157404 | || | || ||| | | | | | ||| ||||| ||||| ||||||||| Sbjct 1918008 ATTGTTCTACATTTCTTACTTAGTGTAGCTTGCTACATGGGTCGTGAATGGGAACTTAAC 1918067 Query 157405 TACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCG 157464 | ||||| ||||||| | ||||| |||||| || || | || | || |||| Sbjct 1918068 TTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTGATGCAGCTGTT 1918127 Query 157465 AGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTT 157524 | || || ||| | |||||||| | |||||||| || || |||| |||||| | Sbjct 1918128 ATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGAATGCCTTTA 1918187 Query 157525 GGTATCTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATG 157584 || || | ||||||||| || | |||| | || || ||| ||||| |||||||||||| Sbjct 1918188 GGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAATATTCTTATG 1918247 Query 157585 CATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGG 157622 |||| || ||| || | | || |||| ||||| || Sbjct 1918248 CATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGG 1918285 >seq7 Length=51758522 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 157377 CTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157436 ||| ||||| ||||| || |||||| || ||| | |||||||| || ||||| ||| Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 47750187 Query 157437 TGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCA 157496 ||| || || || || || || || || | ||| || ||| | |||||||| | ||||| Sbjct 47750188 TGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCA 47750247 Query 157497 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGT 157556 ||| || || |||| ||||||| | || || ||||||||||| || | |||| | || Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 157557 CTTCCAGGCAGAGCACAATATTCTTATGCATCCGTT 157592 || ||||| ||||| ||||||||||||||||| || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq1 Length=52205531 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 159483 CGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTT 159542 ||||| ||||| || ||||| || |||| ||||| || || || ||| | ||||||||| Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 159543 ATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCT 159602 ||||| ||||| || || | ||| |||||| | |||| | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 159603 CTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAA 159662 || || | |||||||| |||||||| |||||| ||| | ||||| |||||||| ||| Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 159663 TTTGAAACGTTCTACACCAAGAACATTCT 159691 ||||| || ||||||||||| || ||||| Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCT 38350289 >seq8 Length=59662532 Score = 116 bits (128), Expect = 4e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 157898 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 157957 |||| || |||||||| ||| | ||||| |||| |||||||| | || |||||||| | Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 157958 ATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 158017 || | | ||||| ||| |||||||||||||| |||||||| ||||| || || || | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 158018 TCCCACTGGATCTTGCTGC 158036 |||| || ||||| ||||| Sbjct 31293340 TCCCTCTAGATCTAGCTGC 31293358 Score = 105 bits (116), Expect = 7e-18 Identities = 179/258 (69%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 159465 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAG 159524 || ||||| ||||| || ||||| ||||| || ||||| || |||| ||| | Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTCAT------ 1232818 Query 159525 CGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATT 159584 ||| | |||||||||||||| ||||| || || | ||| |||| | | || Sbjct 1232817 ---TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 159585 GGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 159644 || | | ||| | || | || | ||||||| |||||||| |||||| ||| | Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 159645 GCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGA 159704 ||||| ||| |||| |||||||| || ||| ||| ||| || |||| ||| || |||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTC-TCTTAA-AAAGGT 1232643 Query 159705 CTACGTGCTTGGTTGGCA 159722 | ||||| ||| ||||| Sbjct 1232642 ATTCGTGCGTGGATGGCA 1232625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545268774328640