Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq9 188 2e-43 seq7 161 3e-35 seq8 87.8 5e-13 >seq9 Length=37469608 Score = 188 bits (208), Expect = 2e-43 Identities = 475/716 (66%), Gaps = 26/716 (4%) Strand=Plus/Plus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || ||||| || || || | || || ||||| || | |||||| || | ||| || || Sbjct 1917807 TTTATTATCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTT 1917866 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAAT 19717 | || ||| |||||||||||||| ||||| || || || ||| | Sbjct 1917867 TTTGGATCCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCG 1917926 Query 19718 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTAC 19777 || || | | || || || || || ||||||| | || |||||||||| || ||| Sbjct 1917927 GCTATAGATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATAC 1917986 Query 19778 AACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCAT--CTATGCTTACA 19835 |||| || || | |||| | || | || ||| | || | | || |||| ||| Sbjct 1917987 AACGACGGTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCT-TGCT-ACA 1918044 Query 19836 TGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCT 19895 |||| || || |||||||||| || ||| | || ||| | ||||||| |||||| | Sbjct 1918045 TGGGTCGTGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGATTGCTGTTGCAT 1918104 Query 19896 ACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGT 19954 | || |||| | |||||| | || || ||||| | |||| || ||||||| || Sbjct 1918105 ATTCAACTCCTGATGCAGCTGTTATTGTTGT-TTTCTTGATCTATCCTATTGGTCAAGGA 1918163 Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014 ||||| || |||| |||||||| || || | ||||| ||||| | ||| | ||||| Sbjct 1918164 AGCTTTTCGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTT 1918223 Query 20015 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTC 20074 || || ||||| ||||| ||||| | || ||| || | ||||| |||||||||| Sbjct 1918224 CAGATTGAGCATAATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTT 1918283 Query 20075 GGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAG 20134 || || ||||||||||| || | | ||| | || || | || ||| ||| Sbjct 1918284 GGCAACTCCCTATTCAGTGCTATAAATGATTCCTTAGTAACTTTCTACCTT---AATGAA 1918340 Query 20135 ACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTAT 20194 || || || | |||||||| ||||| ||| | || | | |||| Sbjct 1918341 TCTGCT---------------AATGAAGGTTACAAATTTGGTCAAAAGGACAAAATCTAT 1918385 Query 20195 AACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAAC 20254 | || |||| ||||||| ||| |||| | |||||||| ||||| || |||||| Sbjct 1918386 GATATTATAGCTGCTCATGATTATTTTGTCGGATTGATCTTTCAATATGCAAGTTTCAAT 1918445 Query 20255 AATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310 ||| |||| | || | || ||||| | || ||| | || |||| |||||||| Sbjct 1918446 AATTCTCGTTTTTTA-ATTTTTTCCTAGTTGTTTGG-CTGTAATAGGTATTTGGTT 1918499 >seq7 Length=51758522 Score = 161 bits (178), Expect = 3e-35 Identities = 167/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 19832 TACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTT 19891 |||||||| || || || |||||||| | ||| || || ||| | ||||||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 19892 GCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCA 19950 || || || ||||| ||||||||||| |||| || ||||| | |||| || ||||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGT-TTTCTTGATCTATCCTATTGGTCA 47750247 Query 19951 GGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGT 20010 || ||||| || |||| ||||||||| || || || ||||| ||||| | ||| | || Sbjct 47750248 AGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 47750307 Query 20011 ATTCCAAGCCGAACATAACATTCTCATGCACCCGTT 20046 ||| || || || ||||| ||||| ||||| || || Sbjct 47750308 ATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 87.8 bits (96), Expect = 5e-13 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 20352 GTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTG 20411 |||| || || ||||| ||| | | || | | |||||||| || |||| ||||||| Sbjct 31293220 GTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTG 31293279 Query 20412 ACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACT 20471 | ||| | || || ||||| || || | || || ||||||||||| ||||||||||| | Sbjct 31293280 ATATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATT 31293339 Query 20472 TCCCACTTGACCTTGC 20487 |||| || || || || Sbjct 31293340 TCCCTCTAGATCTAGC 31293355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148827548721864