Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq9 217 4e-52 seq7 167 7e-37 seq8 100 8e-17 >seq9 Length=37469608 Score = 217 bits (240), Expect = 4e-52 Identities = 540/811 (67%), Gaps = 28/811 (3%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||| | ||||| ||||||| | || || | |||||| || | | |||||| || Sbjct 1917714 TTTTATAACTGGATAACCAGCATCGAAAATCTTCTTTACATATGATTGTTTGGTGTTTTG 1917773 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 |||||||| | | | | | ||| ||||| || ||||| || || || | ||| || Sbjct 1917774 ATGATTCCTATTGTGTTAACCACAACT-TTTGTATTTATTATCGCTTTTATCGTTGCCCC 1917832 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| || || | |||||| || | |||||||||| || || |||||||||||||| Sbjct 1917833 TCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGATCCCTACTTTATGGAAACAA 1917892 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAAT 18962 ||||| || || || ||| | || || | | || || || || || Sbjct 1917893 TATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAGATTTGCATTTTTATCCTAT 1917952 Query 18963 TTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGT 19022 ||||||| | || |||||||||| || ||||||| || || | |||| | || Sbjct 1917953 ATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACGGTCCTTATGAACTAATTGT 1918012 Query 19023 CTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 | || ||| | || | || || ||| |||||||| || || |||||||||| || | Sbjct 1918013 TCTACATTTCTTACTTAGTGTAGCT-TGC-TACATGGGTCGTGAATGGGAACTTAACTTT 1918070 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || | || |||| | ||||||| |||||| || ||| |||||| ||| || | | Sbjct 1918071 CGTTTGGGTATGCATCATTGGATTGCTGTTGCATATTCAACTCCTGATGCAGCTGTTATT 1918130 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 | || ||| | ||||||| |||||||||| |||| || | |||||||| || Sbjct 1918131 GTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGAATGCCTTTAGGA 1918190 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 ||| |||||| ||||| | ||| ||||||| ||| ||| ||||| || || ||||| Sbjct 1918191 ATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTGAGCATAATATTCTTATGCAT 1918250 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 | || ||| || | |||| ||||||| || ||| || ||||| ||||| || | Sbjct 1918251 CAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACTCCCTATTCAGTGCTATAAAT 1918310 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTAT 19380 | ||| | || || | || || || ||| |||| || | Sbjct 1918311 GATTCCTTAGTAACTTTCTACCT------------TAATGA------ATCTGCTAATGAA 1918352 Query 19381 GGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTT 19440 || ||||| ||||| ||| | || | | ||| | ||| | |||||||||| |||||| Sbjct 1918353 GGTTACAAATTTGGTCAAAAGGACAAAATCTATGATATTATAGCTGCTCATGATTATTTT 1918412 Query 19441 GGTCGGCTT-ATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||||| || || || || || ||| ||||| ||| |||| | || |||| || | Sbjct 1918413 -GTCGGATTGATCTTTCAATATGCAAGTTTCAATAATTCTCGTTTTTTA-ATTTTTTCCT 1918470 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530 | || |||| |||| | || ||||||||| Sbjct 1918471 AGTTGTTTGG-CTGTAATAGGTATTTGGTTT 1918500 Score = 91.5 bits (100), Expect = 4e-14 Identities = 185/268 (69%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||||| ||| | ||||||| | | | || |||||||| || | |||||||| || Sbjct 33213477 TTTTGTAACTAGATAACCAGCATAAAAAATCGTCTTTACATAAGATGGTTTGGTGTTTTG 33213536 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 ||||||| | | | | || ||| | ||| || ||||| || || |||| ||| || Sbjct 33213537 ATGATTCTTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATTGTTGCTCC 33213595 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTT-CTTTATGGAAACA 18901 ||| |||| |||||||| || || || |||| | || | ||| ||||||||||| | Sbjct 33213596 TCCATTAGATATTGATGGTATTCGTGAACCTGATTTTGG-ATCCTTACTTTATGGAAATA 33213654 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAA 18961 | ||||| || || || | |||| | || || || || | || || || || | Sbjct 33213655 ATATCATTTCTGGTGCAATTATTCCTACTTCCACGGCTATAGGTTTGCATTTTTATCCTA 33213714 Query 18962 TTTGGGAAGCTAATTCACTTGATGAATG 18989 | |||||||| | || |||||||||| Sbjct 33213715 TATGGGAAGC-GACTCTGTTGATGAATG 33213741 >seq7 Length=51758522 Score = 167 bits (184), Expect = 7e-37 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19051 TACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTT 19110 |||||||| || || || |||||||| | ||| || || ||||| ||||||||| |||| Sbjct 47750129 TACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTT 47750188 Query 19111 GCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAA 19170 || || |||||||||||||| || || |||| || ||| | ||||||| |||||||| Sbjct 47750189 GCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAA 47750248 Query 19171 GGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTA 19230 || |||| || | ||||||||| || ||| |||||| ||||| | ||| ||||| Sbjct 47750249 GGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTGTA 47750308 Query 19231 TTCCAGGCTGAACATAACATCCTCATGCACCCGTT 19265 || |||||||| ||||| || || ||||| || || Sbjct 47750309 TTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq8 Length=59662532 Score = 100 bits (110), Expect = 8e-17 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 19573 TTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGAC 19632 ||||| || ||||| ||| | |||| | | |||||||| || |||| |||||||| Sbjct 31293222 TTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGAT 31293281 Query 19633 ATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTC 19692 ||| | || || |||||||| || | || || ||||| ||||||||||||||||| ||| Sbjct 31293282 ATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATTTC 31293341 Query 19693 CCACTTGATTTGGCT 19707 || || ||| | ||| Sbjct 31293342 CCTCTAGATCTAGCT 31293356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141147613291464