Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=52284309 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| || || || ||| | ||||| |||| || ||| || Sbjct 30377952 ATGCAGATCTTTGTGAAAACTTTGACAGGCAAAACTATCACCCTCGAGGTGGAATCCTCT 30378011 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || || || || ||||| ||||| || || |||||| Sbjct 30378012 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 30378071 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || |||| || || || |||||||| |||| | | | | | |||||||||| Sbjct 30378072 CAGAGGCTGATTTTCGCTGGTAAGCAACTCGAGGATGGTCGCACTCTTGCCGATTACAAT 30378131 Query 25355 ATTCAAAAAGAATCCAC 25371 || ||||| |||||||| Sbjct 30378132 ATCCAAAAGGAATCCAC 30378148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/246 (68%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 25156 TAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCAC 25215 |||||| ||| |||| ||||| | || || ||||| || || || || | || || Sbjct 30274111 TAGTTTCTGATTGAACAG-ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAAC 30274169 Query 25216 GATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGA 25275 |||| || ||| | || || || || | || ||| || || || ||||| Sbjct 30274170 CCTCGAGGTAGAATCGTCTGACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAAGA 30274229 Query 25276 GGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 25335 |||||| || || |||||||| || || |||| | || |||||||| || |||| || Sbjct 30274230 GGGTATCCCTCCAGATCAGCAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAG 30274289 Query 25336 AAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAG 25395 || | |||||| |||||||| || || |||||| | || | ||| | | ||||| Sbjct 30274290 AACCCTTGCCGATTATAATATTCAGAAGGAGTCCACCCTCCACCTGGTGCTTCGTTTGAG 30274349 Query 25396 AGGAGG 25401 ||| || Sbjct 30274350 AGGTGG 30274355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/246 (68%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 25156 TAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCAC 25215 |||||| ||| |||| ||||| | || || ||||| || || || || | || || Sbjct 30309541 TAGTTTCTGATTGAACAG-ATGCAGATATTCGTGAAAACTTTGACTGGCAAGACCATAAC 30309599 Query 25216 GATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGA 25275 |||| || ||| | || ||||| || | || ||| || || || ||||| Sbjct 30309600 CCTCGAGGTAGAATCGTCTGACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAAGA 30309659 Query 25276 GGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 25335 |||||| || || |||||||| || || |||| | || |||||||| || |||| || Sbjct 30309660 GGGTATCCCTCCGGATCAGCAGAGGCTGATTTTTGCTGGTAAACAACTTGAGGATGGAAG 30309719 Query 25336 AAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAG 25395 || | ||||| |||||||| || || |||||| | || || ||| | | || || Sbjct 30309720 AACCCTTGCAGATTATAATATTCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTAAG 30309779 Query 25396 AGGAGG 25401 ||| || Sbjct 30309780 AGGTGG 30309785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090460914560